Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.25□□□□□ -0.13
Trim29Q8R2Q0 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 Gm25261-201ENSMUST00000157416 134 ntBASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 Gm44124-201ENSMUST00000204159 472 ntBASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 Gm45484-201ENSMUST00000210310 1141 ntBASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 Gm9899-201ENSMUST00000065519 555 ntBASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim29Q8R2Q0 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim29Q8R2Q0 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim29Q8R2Q0 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim29Q8R2Q0 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim29Q8R2Q0 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim29Q8R2Q0 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim29Q8R2Q0 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Trim29Q8R2Q0 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim29Q8R2Q0 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim29Q8R2Q0 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim29Q8R2Q0 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim29Q8R2Q0 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim29Q8R2Q0 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim29Q8R2Q0 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim29Q8R2Q0 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.23□□□□□ -0.13
Trim29Q8R2Q0 Gm24548-201ENSMUST00000158650 108 ntBASIC14.23□□□□□ -0.13
Trim29Q8R2Q0 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim29Q8R2Q0 AY702102-202ENSMUST00000194651 1173 ntBASIC14.23□□□□□ -0.13
Trim29Q8R2Q0 Gm37008-201ENSMUST00000195712 319 ntBASIC14.23□□□□□ -0.13
Trim29Q8R2Q0 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.23□□□□□ -0.13
Trim29Q8R2Q0 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim29Q8R2Q0 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim29Q8R2Q0 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim29Q8R2Q0 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim29Q8R2Q0 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim29Q8R2Q0 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim29Q8R2Q0 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim29Q8R2Q0 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim29Q8R2Q0 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim29Q8R2Q0 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim29Q8R2Q0 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim29Q8R2Q0 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim29Q8R2Q0 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim29Q8R2Q0 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim29Q8R2Q0 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim29Q8R2Q0 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim29Q8R2Q0 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim29Q8R2Q0 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim29Q8R2Q0 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trim29Q8R2Q0 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
Trim29Q8R2Q0 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim29Q8R2Q0 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
Trim29Q8R2Q0 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trim29Q8R2Q0 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.22□□□□□ -0.13
Trim29Q8R2Q0 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.22□□□□□ -0.13
Trim29Q8R2Q0 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.22□□□□□ -0.13
Trim29Q8R2Q0 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim29Q8R2Q0 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.22□□□□□ -0.13
Trim29Q8R2Q0 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.22□□□□□ -0.13
Trim29Q8R2Q0 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim29Q8R2Q0 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim29Q8R2Q0 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trim29Q8R2Q0 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trim29Q8R2Q0 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms