Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC15.91■□□□□ 0.14
Chmp7Q8R1T1 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC15.91■□□□□ 0.14
Chmp7Q8R1T1 Gm42840-201ENSMUST00000200303 2251 ntBASIC15.91■□□□□ 0.14
Chmp7Q8R1T1 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC15.91■□□□□ 0.14
Chmp7Q8R1T1 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp7Q8R1T1 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp7Q8R1T1 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC15.91■□□□□ 0.14
Chmp7Q8R1T1 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp7Q8R1T1 AC159819.2-201ENSMUST00000216151 342 ntBASIC15.91■□□□□ 0.14
Chmp7Q8R1T1 Gm18556-201ENSMUST00000219748 1031 ntBASIC15.91■□□□□ 0.14
Chmp7Q8R1T1 Gm270-201ENSMUST00000223010 976 ntBASIC15.91■□□□□ 0.14
Chmp7Q8R1T1 Ntng1-201ENSMUST00000051253 327 ntBASIC15.91■□□□□ 0.14
Chmp7Q8R1T1 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Chmp7Q8R1T1 Gm21811-201ENSMUST00000096485 930 ntBASIC15.91■□□□□ 0.14
Chmp7Q8R1T1 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp7Q8R1T1 Grk6-205ENSMUST00000224653 2976 ntBASIC15.91■□□□□ 0.14
Chmp7Q8R1T1 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp7Q8R1T1 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp7Q8R1T1 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp7Q8R1T1 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp7Q8R1T1 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Chmp7Q8R1T1 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp7Q8R1T1 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp7Q8R1T1 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp7Q8R1T1 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Chmp7Q8R1T1 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp7Q8R1T1 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp7Q8R1T1 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp7Q8R1T1 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp7Q8R1T1 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp7Q8R1T1 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp7Q8R1T1 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp7Q8R1T1 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp7Q8R1T1 Gm43081-201ENSMUST00000199082 1380 ntBASIC15.9■□□□□ 0.14
Chmp7Q8R1T1 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Chmp7Q8R1T1 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp7Q8R1T1 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.9■□□□□ 0.14
Chmp7Q8R1T1 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp7Q8R1T1 Gm12501-201ENSMUST00000119163 529 ntBASIC15.9■□□□□ 0.14
Chmp7Q8R1T1 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC15.9■□□□□ 0.14
Chmp7Q8R1T1 Gm19353-201ENSMUST00000184561 445 ntBASIC15.9■□□□□ 0.14
Chmp7Q8R1T1 Gm42863-201ENSMUST00000197875 2958 ntBASIC15.9■□□□□ 0.14
Chmp7Q8R1T1 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC15.9■□□□□ 0.14
Chmp7Q8R1T1 AC093022.5-201ENSMUST00000226841 1079 ntBASIC15.9■□□□□ 0.14
Chmp7Q8R1T1 AC133602.1-201ENSMUST00000227510 509 ntBASIC15.9■□□□□ 0.14
Chmp7Q8R1T1 AC154276.3-201ENSMUST00000227643 998 ntBASIC15.9■□□□□ 0.14
Chmp7Q8R1T1 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp7Q8R1T1 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Chmp7Q8R1T1 Gm5455-201ENSMUST00000058710 715 ntBASIC15.9■□□□□ 0.14
Chmp7Q8R1T1 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC15.9■□□□□ 0.14
Chmp7Q8R1T1 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp7Q8R1T1 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp7Q8R1T1 Gm13812-201ENSMUST00000118061 1347 ntBASIC15.9■□□□□ 0.14
Chmp7Q8R1T1 Gm13810-201ENSMUST00000118584 1347 ntBASIC15.9■□□□□ 0.14
Chmp7Q8R1T1 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC15.9■□□□□ 0.14
Chmp7Q8R1T1 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp7Q8R1T1 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp7Q8R1T1 Gm45638-201ENSMUST00000211507 2878 ntBASIC15.89■□□□□ 0.13
Chmp7Q8R1T1 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC15.89■□□□□ 0.13
Chmp7Q8R1T1 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp7Q8R1T1 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp7Q8R1T1 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp7Q8R1T1 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp7Q8R1T1 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Chmp7Q8R1T1 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Chmp7Q8R1T1 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp7Q8R1T1 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp7Q8R1T1 Gm13045-201ENSMUST00000119019 712 ntBASIC15.89■□□□□ 0.13
Chmp7Q8R1T1 Gm13461-201ENSMUST00000120980 662 ntBASIC15.89■□□□□ 0.13
Chmp7Q8R1T1 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC15.89■□□□□ 0.13
Chmp7Q8R1T1 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC15.89■□□□□ 0.13
Chmp7Q8R1T1 Ighv4-2-201ENSMUST00000192975 362 ntBASIC15.89■□□□□ 0.13
Chmp7Q8R1T1 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp7Q8R1T1 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC15.89■□□□□ 0.13
Chmp7Q8R1T1 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Chmp7Q8R1T1 Gm43045-201ENSMUST00000198725 2095 ntBASIC15.89■□□□□ 0.13
Chmp7Q8R1T1 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp7Q8R1T1 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp7Q8R1T1 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp7Q8R1T1 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC15.89■□□□□ 0.13
Chmp7Q8R1T1 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp7Q8R1T1 Gm45643-201ENSMUST00000211364 1484 ntBASIC15.89■□□□□ 0.13
Chmp7Q8R1T1 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp7Q8R1T1 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Chmp7Q8R1T1 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp7Q8R1T1 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp7Q8R1T1 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp7Q8R1T1 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp7Q8R1T1 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp7Q8R1T1 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Chmp7Q8R1T1 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp7Q8R1T1 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC15.88■□□□□ 0.13
Chmp7Q8R1T1 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp7Q8R1T1 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp7Q8R1T1 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp7Q8R1T1 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Chmp7Q8R1T1 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Chmp7Q8R1T1 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC15.88■□□□□ 0.13
Chmp7Q8R1T1 Gm15432-201ENSMUST00000121106 195 ntBASIC15.88■□□□□ 0.13
Chmp7Q8R1T1 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms