Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Ebf4Q8K4J2 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Ebf4Q8K4J2 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
Ebf4Q8K4J2 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 Gm5312-201ENSMUST00000203728 547 ntBASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf4Q8K4J2 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 Cog3-203ENSMUST00000227473 4197 ntBASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 Gm27618-201ENSMUST00000183671 60 ntBASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms