Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn1Q8K445 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn1Q8K445 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn1Q8K445 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn1Q8K445 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.77□□□□□ -0.53
Clrn1Q8K445 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Clrn1Q8K445 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn1Q8K445 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn1Q8K445 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn1Q8K445 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Clrn1Q8K445 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Clrn1Q8K445 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.76□□□□□ -0.53
Clrn1Q8K445 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn1Q8K445 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.76□□□□□ -0.53
Clrn1Q8K445 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn1Q8K445 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn1Q8K445 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn1Q8K445 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn1Q8K445 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn1Q8K445 Gm24231-201ENSMUST00000104315 133 ntBASIC11.76□□□□□ -0.53
Clrn1Q8K445 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.76□□□□□ -0.53
Clrn1Q8K445 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.76□□□□□ -0.53
Clrn1Q8K445 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.76□□□□□ -0.53
Clrn1Q8K445 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.76□□□□□ -0.53
Clrn1Q8K445 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.76□□□□□ -0.53
Clrn1Q8K445 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.76□□□□□ -0.53
Clrn1Q8K445 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.76□□□□□ -0.53
Clrn1Q8K445 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn1Q8K445 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn1Q8K445 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.76□□□□□ -0.53
Clrn1Q8K445 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn1Q8K445 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn1Q8K445 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn1Q8K445 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn1Q8K445 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn1Q8K445 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn1Q8K445 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.76□□□□□ -0.53
Clrn1Q8K445 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.76□□□□□ -0.53
Clrn1Q8K445 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.76□□□□□ -0.53
Clrn1Q8K445 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn1Q8K445 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn1Q8K445 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Clrn1Q8K445 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn1Q8K445 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn1Q8K445 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn1Q8K445 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn1Q8K445 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn1Q8K445 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Mir1247-201ENSMUST00000116706 82 ntBASIC11.75□□□□□ -0.53
Clrn1Q8K445 Gm11597-201ENSMUST00000121423 964 ntBASIC11.75□□□□□ -0.53
Clrn1Q8K445 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.75□□□□□ -0.53
Clrn1Q8K445 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Gm37444-201ENSMUST00000193605 439 ntBASIC11.75□□□□□ -0.53
Clrn1Q8K445 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.75□□□□□ -0.53
Clrn1Q8K445 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.75□□□□□ -0.53
Clrn1Q8K445 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Gm9823-201ENSMUST00000051212 327 ntBASIC11.75□□□□□ -0.53
Clrn1Q8K445 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.75□□□□□ -0.53
Clrn1Q8K445 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.75□□□□□ -0.53
Clrn1Q8K445 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.75□□□□□ -0.53
Clrn1Q8K445 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Clrn1Q8K445 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn1Q8K445 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 117.4 ms