Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Gm23119-201ENSMUST00000158610 140 ntBASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Gm2546-201ENSMUST00000182630 991 ntBASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Olfr284-202ENSMUST00000206647 966 ntBASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf39Q8K2Z2 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf39Q8K2Z2 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Prpf39Q8K2Z2 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf39Q8K2Z2 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Prpf39Q8K2Z2 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf39Q8K2Z2 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Prpf39Q8K2Z2 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.93□□□□□ -0.34
Prpf39Q8K2Z2 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf39Q8K2Z2 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.93□□□□□ -0.34
Prpf39Q8K2Z2 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf39Q8K2Z2 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf39Q8K2Z2 Gm14999-201ENSMUST00000121039 624 ntBASIC12.93□□□□□ -0.34
Prpf39Q8K2Z2 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.93□□□□□ -0.34
Prpf39Q8K2Z2 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.93□□□□□ -0.34
Prpf39Q8K2Z2 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.93□□□□□ -0.34
Prpf39Q8K2Z2 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.93□□□□□ -0.34
Prpf39Q8K2Z2 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.93□□□□□ -0.34
Prpf39Q8K2Z2 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Prpf39Q8K2Z2 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.93□□□□□ -0.34
Prpf39Q8K2Z2 Gm37489-201ENSMUST00000191883 159 ntBASIC12.93□□□□□ -0.34
Prpf39Q8K2Z2 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.93□□□□□ -0.34
Prpf39Q8K2Z2 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.93□□□□□ -0.34
Prpf39Q8K2Z2 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf39Q8K2Z2 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf39Q8K2Z2 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf39Q8K2Z2 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf39Q8K2Z2 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf39Q8K2Z2 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.93□□□□□ -0.34
Prpf39Q8K2Z2 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Prpf39Q8K2Z2 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.93□□□□□ -0.34
Prpf39Q8K2Z2 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.93□□□□□ -0.34
Prpf39Q8K2Z2 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf39Q8K2Z2 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.93□□□□□ -0.34
Prpf39Q8K2Z2 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf39Q8K2Z2 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf39Q8K2Z2 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf39Q8K2Z2 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf39Q8K2Z2 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf39Q8K2Z2 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Prpf39Q8K2Z2 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf39Q8K2Z2 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf39Q8K2Z2 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf39Q8K2Z2 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf39Q8K2Z2 Gm9083-201ENSMUST00000120423 819 ntBASIC12.92□□□□□ -0.34
Prpf39Q8K2Z2 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf39Q8K2Z2 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.92□□□□□ -0.34
Prpf39Q8K2Z2 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.92□□□□□ -0.34
Prpf39Q8K2Z2 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf39Q8K2Z2 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms