Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CopaQ8CIE6 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CopaQ8CIE6 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CopaQ8CIE6 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CopaQ8CIE6 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
CopaQ8CIE6 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CopaQ8CIE6 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
CopaQ8CIE6 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CopaQ8CIE6 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CopaQ8CIE6 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CopaQ8CIE6 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CopaQ8CIE6 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
CopaQ8CIE6 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CopaQ8CIE6 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CopaQ8CIE6 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CopaQ8CIE6 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CopaQ8CIE6 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CopaQ8CIE6 Gm22323-201ENSMUST00000103832 109 ntBASIC12.76□□□□□ -0.37
CopaQ8CIE6 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CopaQ8CIE6 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.76□□□□□ -0.37
CopaQ8CIE6 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CopaQ8CIE6 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CopaQ8CIE6 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.76□□□□□ -0.37
CopaQ8CIE6 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CopaQ8CIE6 Gm37489-201ENSMUST00000191883 159 ntBASIC12.76□□□□□ -0.37
CopaQ8CIE6 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.76□□□□□ -0.37
CopaQ8CIE6 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CopaQ8CIE6 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CopaQ8CIE6 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CopaQ8CIE6 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CopaQ8CIE6 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
CopaQ8CIE6 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CopaQ8CIE6 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CopaQ8CIE6 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.76□□□□□ -0.37
CopaQ8CIE6 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CopaQ8CIE6 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CopaQ8CIE6 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.76□□□□□ -0.37
CopaQ8CIE6 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CopaQ8CIE6 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CopaQ8CIE6 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CopaQ8CIE6 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CopaQ8CIE6 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CopaQ8CIE6 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CopaQ8CIE6 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.75□□□□□ -0.37
CopaQ8CIE6 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CopaQ8CIE6 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CopaQ8CIE6 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.75□□□□□ -0.37
CopaQ8CIE6 Gm4986-201ENSMUST00000119731 549 ntBASIC12.75□□□□□ -0.37
CopaQ8CIE6 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CopaQ8CIE6 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CopaQ8CIE6 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CopaQ8CIE6 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.75□□□□□ -0.37
CopaQ8CIE6 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CopaQ8CIE6 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.75□□□□□ -0.37
CopaQ8CIE6 Gm4857-201ENSMUST00000192718 785 ntBASIC12.75□□□□□ -0.37
CopaQ8CIE6 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CopaQ8CIE6 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.75□□□□□ -0.37
CopaQ8CIE6 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.75□□□□□ -0.37
CopaQ8CIE6 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.75□□□□□ -0.37
CopaQ8CIE6 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CopaQ8CIE6 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CopaQ8CIE6 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.75□□□□□ -0.37
CopaQ8CIE6 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CopaQ8CIE6 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.75□□□□□ -0.37
CopaQ8CIE6 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CopaQ8CIE6 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CopaQ8CIE6 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CopaQ8CIE6 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CopaQ8CIE6 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CopaQ8CIE6 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CopaQ8CIE6 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CopaQ8CIE6 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CopaQ8CIE6 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CopaQ8CIE6 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.75□□□□□ -0.37
CopaQ8CIE6 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.75□□□□□ -0.37
CopaQ8CIE6 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CopaQ8CIE6 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CopaQ8CIE6 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CopaQ8CIE6 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
CopaQ8CIE6 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CopaQ8CIE6 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CopaQ8CIE6 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.74□□□□□ -0.37
CopaQ8CIE6 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CopaQ8CIE6 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CopaQ8CIE6 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.74□□□□□ -0.37
CopaQ8CIE6 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CopaQ8CIE6 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CopaQ8CIE6 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CopaQ8CIE6 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CopaQ8CIE6 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CopaQ8CIE6 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CopaQ8CIE6 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CopaQ8CIE6 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.74□□□□□ -0.37
CopaQ8CIE6 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.74□□□□□ -0.37
CopaQ8CIE6 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CopaQ8CIE6 Gm24255-201ENSMUST00000104481 128 ntBASIC12.74□□□□□ -0.37
CopaQ8CIE6 Snord83b-201ENSMUST00000104546 94 ntBASIC12.74□□□□□ -0.37
CopaQ8CIE6 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CopaQ8CIE6 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CopaQ8CIE6 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms