Protein–RNA interactions for Protein: Q8CFD4

Snx8, Sorting nexin-8, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx8Q8CFD4 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Gm23363-201ENSMUST00000175024 79 ntBASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Gm26927-201ENSMUST00000182385 965 ntBASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Gm32025-201ENSMUST00000217960 307 ntBASIC12.42□□□□□ -0.42
Snx8Q8CFD4 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx8Q8CFD4 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Snx8Q8CFD4 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snx8Q8CFD4 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.41□□□□□ -0.42
Snx8Q8CFD4 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snx8Q8CFD4 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snx8Q8CFD4 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Snx8Q8CFD4 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Snx8Q8CFD4 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
Snx8Q8CFD4 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Snx8Q8CFD4 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snx8Q8CFD4 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snx8Q8CFD4 Gm11425-201ENSMUST00000119608 498 ntBASIC12.41□□□□□ -0.42
Snx8Q8CFD4 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snx8Q8CFD4 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.41□□□□□ -0.42
Snx8Q8CFD4 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.41□□□□□ -0.42
Snx8Q8CFD4 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.41□□□□□ -0.42
Snx8Q8CFD4 Gm27731-201ENSMUST00000185192 107 ntBASIC12.41□□□□□ -0.42
Snx8Q8CFD4 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.41□□□□□ -0.42
Snx8Q8CFD4 Gm8099-201ENSMUST00000200510 742 ntBASIC12.41□□□□□ -0.42
Snx8Q8CFD4 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Snx8Q8CFD4 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Snx8Q8CFD4 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.41□□□□□ -0.42
Snx8Q8CFD4 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.41□□□□□ -0.42
Snx8Q8CFD4 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snx8Q8CFD4 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Snx8Q8CFD4 Gm9396-201ENSMUST00000076703 567 ntBASIC12.41□□□□□ -0.42
Snx8Q8CFD4 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snx8Q8CFD4 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snx8Q8CFD4 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Snx8Q8CFD4 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snx8Q8CFD4 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snx8Q8CFD4 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Snx8Q8CFD4 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Snx8Q8CFD4 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.41□□□□□ -0.42
Snx8Q8CFD4 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.41□□□□□ -0.42
Snx8Q8CFD4 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Snx8Q8CFD4 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Snx8Q8CFD4 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snx8Q8CFD4 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Snx8Q8CFD4 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Snx8Q8CFD4 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.4□□□□□ -0.42
Snx8Q8CFD4 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.4□□□□□ -0.42
Snx8Q8CFD4 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.4□□□□□ -0.42
Snx8Q8CFD4 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snx8Q8CFD4 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Snx8Q8CFD4 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snx8Q8CFD4 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.4□□□□□ -0.42
Snx8Q8CFD4 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Snx8Q8CFD4 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snx8Q8CFD4 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Snx8Q8CFD4 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.4□□□□□ -0.42
Snx8Q8CFD4 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms