Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Gm45266-201ENSMUST00000210111 2173 ntBASIC15.31■□□□□ 0.04
Trim52Q8CDV4 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim52Q8CDV4 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Gm9550-201ENSMUST00000161130 862 ntBASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC15.3■□□□□ 0.04
Trim52Q8CDV4 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Gm43081-201ENSMUST00000199082 1380 ntBASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Gm18556-201ENSMUST00000219748 1031 ntBASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Gm29787-201ENSMUST00000222129 849 ntBASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim52Q8CDV4 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim52Q8CDV4 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim52Q8CDV4 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim52Q8CDV4 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim52Q8CDV4 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim52Q8CDV4 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim52Q8CDV4 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim52Q8CDV4 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trim52Q8CDV4 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trim52Q8CDV4 Gm12616-201ENSMUST00000118594 382 ntBASIC15.29■□□□□ 0.04
Trim52Q8CDV4 Gm8566-201ENSMUST00000120174 465 ntBASIC15.29■□□□□ 0.04
Trim52Q8CDV4 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC15.29■□□□□ 0.04
Trim52Q8CDV4 Gm12624-201ENSMUST00000177615 382 ntBASIC15.29■□□□□ 0.04
Trim52Q8CDV4 Gm12621-201ENSMUST00000177760 382 ntBASIC15.29■□□□□ 0.04
Trim52Q8CDV4 Gm12615-201ENSMUST00000177970 382 ntBASIC15.29■□□□□ 0.04
Trim52Q8CDV4 Gm12622-201ENSMUST00000177975 382 ntBASIC15.29■□□□□ 0.04
Trim52Q8CDV4 Gm12627-201ENSMUST00000178412 382 ntBASIC15.29■□□□□ 0.04
Trim52Q8CDV4 Gm12625-201ENSMUST00000179122 382 ntBASIC15.29■□□□□ 0.04
Trim52Q8CDV4 Gm12614-201ENSMUST00000179586 382 ntBASIC15.29■□□□□ 0.04
Trim52Q8CDV4 Gm12613-201ENSMUST00000180323 382 ntBASIC15.29■□□□□ 0.04
Trim52Q8CDV4 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
Trim52Q8CDV4 Gm42629-201ENSMUST00000199063 1102 ntBASIC15.29■□□□□ 0.04
Trim52Q8CDV4 Gm45770-201ENSMUST00000212105 616 ntBASIC15.29■□□□□ 0.04
Trim52Q8CDV4 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC15.29■□□□□ 0.04
Trim52Q8CDV4 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim52Q8CDV4 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trim52Q8CDV4 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim52Q8CDV4 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim52Q8CDV4 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim52Q8CDV4 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim52Q8CDV4 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim52Q8CDV4 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim52Q8CDV4 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim52Q8CDV4 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim52Q8CDV4 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim52Q8CDV4 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim52Q8CDV4 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim52Q8CDV4 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim52Q8CDV4 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim52Q8CDV4 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC15.28■□□□□ 0.04
Trim52Q8CDV4 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trim52Q8CDV4 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim52Q8CDV4 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC15.28■□□□□ 0.04
Trim52Q8CDV4 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC15.28■□□□□ 0.04
Trim52Q8CDV4 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim52Q8CDV4 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trim52Q8CDV4 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim52Q8CDV4 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim52Q8CDV4 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trim52Q8CDV4 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Trim52Q8CDV4 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim52Q8CDV4 Gm12857-201ENSMUST00000117678 592 ntBASIC15.28■□□□□ 0.04
Trim52Q8CDV4 Gm23085-201ENSMUST00000157849 293 ntBASIC15.28■□□□□ 0.04
Trim52Q8CDV4 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Trim52Q8CDV4 Gm8100-201ENSMUST00000182906 988 ntBASIC15.28■□□□□ 0.04
Trim52Q8CDV4 Gm8956-201ENSMUST00000203939 825 ntBASIC15.28■□□□□ 0.04
Trim52Q8CDV4 AC098716.1-201ENSMUST00000213527 703 ntBASIC15.28■□□□□ 0.04
Trim52Q8CDV4 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim52Q8CDV4 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim52Q8CDV4 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms