Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 Gm16481-201ENSMUST00000119074 1227 ntBASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 Gm27552-201ENSMUST00000183351 62 ntBASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 Gm27844-201ENSMUST00000183613 62 ntBASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 Gm43289-201ENSMUST00000200537 1475 ntBASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 AC154252.2-201ENSMUST00000223593 767 ntBASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 5930422O12Rik-201ENSMUST00000059351 840 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
Rsph6aQ8CDR2 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph6aQ8CDR2 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph6aQ8CDR2 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph6aQ8CDR2 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph6aQ8CDR2 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rsph6aQ8CDR2 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph6aQ8CDR2 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph6aQ8CDR2 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph6aQ8CDR2 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph6aQ8CDR2 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rsph6aQ8CDR2 Gm14659-201ENSMUST00000117667 843 ntBASIC16.31■□□□□ 0.2
Rsph6aQ8CDR2 Gm12380-201ENSMUST00000119012 544 ntBASIC16.31■□□□□ 0.2
Rsph6aQ8CDR2 Gm12752-201ENSMUST00000121657 811 ntBASIC16.31■□□□□ 0.2
Rsph6aQ8CDR2 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph6aQ8CDR2 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC16.31■□□□□ 0.2
Rsph6aQ8CDR2 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Rsph6aQ8CDR2 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph6aQ8CDR2 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rsph6aQ8CDR2 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rsph6aQ8CDR2 Gm28925-201ENSMUST00000188586 168 ntBASIC16.31■□□□□ 0.2
Rsph6aQ8CDR2 Gm18753-201ENSMUST00000201000 566 ntBASIC16.31■□□□□ 0.2
Rsph6aQ8CDR2 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph6aQ8CDR2 Gm21027-201ENSMUST00000219300 1236 ntBASIC16.31■□□□□ 0.2
Rsph6aQ8CDR2 CT009713.1-201ENSMUST00000224828 853 ntBASIC16.31■□□□□ 0.2
Rsph6aQ8CDR2 CT025694.1-201ENSMUST00000226188 934 ntBASIC16.31■□□□□ 0.2
Rsph6aQ8CDR2 AC169036.1-201ENSMUST00000227994 296 ntBASIC16.31■□□□□ 0.2
Rsph6aQ8CDR2 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph6aQ8CDR2 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rsph6aQ8CDR2 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph6aQ8CDR2 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph6aQ8CDR2 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rsph6aQ8CDR2 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rsph6aQ8CDR2 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rsph6aQ8CDR2 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Rsph6aQ8CDR2 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph6aQ8CDR2 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph6aQ8CDR2 Gm28323-201ENSMUST00000186817 2499 ntBASIC16.3■□□□□ 0.2
Rsph6aQ8CDR2 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph6aQ8CDR2 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph6aQ8CDR2 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC16.3■□□□□ 0.2
Rsph6aQ8CDR2 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph6aQ8CDR2 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph6aQ8CDR2 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph6aQ8CDR2 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph6aQ8CDR2 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph6aQ8CDR2 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Rsph6aQ8CDR2 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC16.3■□□□□ 0.2
Rsph6aQ8CDR2 Mir6979-201ENSMUST00000183927 56 ntBASIC16.3■□□□□ 0.2
Rsph6aQ8CDR2 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC16.3■□□□□ 0.2
Rsph6aQ8CDR2 Ighv10-4-201ENSMUST00000193702 299 ntBASIC16.3■□□□□ 0.2
Rsph6aQ8CDR2 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
Rsph6aQ8CDR2 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph6aQ8CDR2 Gm43974-201ENSMUST00000205080 684 ntBASIC16.3■□□□□ 0.2
Rsph6aQ8CDR2 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph6aQ8CDR2 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph6aQ8CDR2 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph6aQ8CDR2 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph6aQ8CDR2 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph6aQ8CDR2 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rsph6aQ8CDR2 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms