Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc87Q8CDL9 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc87Q8CDL9 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc87Q8CDL9 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc87Q8CDL9 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ccdc87Q8CDL9 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc87Q8CDL9 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ccdc87Q8CDL9 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ccdc87Q8CDL9 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc87Q8CDL9 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.23□□□□□ -0.29
Ccdc87Q8CDL9 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ccdc87Q8CDL9 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc87Q8CDL9 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc87Q8CDL9 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Ccdc87Q8CDL9 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc87Q8CDL9 Mir1982-201ENSMUST00000157368 74 ntBASIC13.23□□□□□ -0.29
Ccdc87Q8CDL9 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc87Q8CDL9 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc87Q8CDL9 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.23□□□□□ -0.29
Ccdc87Q8CDL9 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.23□□□□□ -0.29
Ccdc87Q8CDL9 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.23□□□□□ -0.29
Ccdc87Q8CDL9 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.23□□□□□ -0.29
Ccdc87Q8CDL9 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.23□□□□□ -0.29
Ccdc87Q8CDL9 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc87Q8CDL9 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.23□□□□□ -0.29
Ccdc87Q8CDL9 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Ccdc87Q8CDL9 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ccdc87Q8CDL9 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc87Q8CDL9 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Ccdc87Q8CDL9 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.23□□□□□ -0.29
Ccdc87Q8CDL9 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc87Q8CDL9 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc87Q8CDL9 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.23□□□□□ -0.29
Ccdc87Q8CDL9 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc87Q8CDL9 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ccdc87Q8CDL9 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc87Q8CDL9 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc87Q8CDL9 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc87Q8CDL9 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.21□□□□□ -0.29
Ccdc87Q8CDL9 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ccdc87Q8CDL9 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc87Q8CDL9 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc87Q8CDL9 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ccdc87Q8CDL9 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc87Q8CDL9 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.21□□□□□ -0.29
Ccdc87Q8CDL9 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc87Q8CDL9 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.21□□□□□ -0.29
Ccdc87Q8CDL9 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.21□□□□□ -0.29
Ccdc87Q8CDL9 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.29
Ccdc87Q8CDL9 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc87Q8CDL9 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc87Q8CDL9 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ccdc87Q8CDL9 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc87Q8CDL9 Gm12203-201ENSMUST00000118235 598 ntBASIC13.21□□□□□ -0.29
Ccdc87Q8CDL9 Gm12209-201ENSMUST00000120089 596 ntBASIC13.21□□□□□ -0.29
Ccdc87Q8CDL9 Gm14704-201ENSMUST00000120300 874 ntBASIC13.21□□□□□ -0.29
Ccdc87Q8CDL9 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms