Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Gm24548-201ENSMUST00000158650 108 ntBASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps53Q8CCB4 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps53Q8CCB4 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.52□□□□□ -0.08
Vps53Q8CCB4 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Vps53Q8CCB4 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
Vps53Q8CCB4 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.52□□□□□ -0.08
Vps53Q8CCB4 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.52□□□□□ -0.08
Vps53Q8CCB4 Gm6015-201ENSMUST00000217493 1586 ntBASIC14.52□□□□□ -0.08
Vps53Q8CCB4 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps53Q8CCB4 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps53Q8CCB4 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC14.52□□□□□ -0.08
Vps53Q8CCB4 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps53Q8CCB4 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Vps53Q8CCB4 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps53Q8CCB4 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.52□□□□□ -0.08
Vps53Q8CCB4 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Vps53Q8CCB4 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps53Q8CCB4 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps53Q8CCB4 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC14.52□□□□□ -0.09
Vps53Q8CCB4 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Vps53Q8CCB4 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Vps53Q8CCB4 Gm3786-201ENSMUST00000202659 378 ntBASIC14.52□□□□□ -0.09
Vps53Q8CCB4 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.52□□□□□ -0.09
Vps53Q8CCB4 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC14.52□□□□□ -0.09
Vps53Q8CCB4 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vps53Q8CCB4 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps53Q8CCB4 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vps53Q8CCB4 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps53Q8CCB4 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Vps53Q8CCB4 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps53Q8CCB4 Gm40377-201ENSMUST00000204604 2015 ntBASIC14.52□□□□□ -0.09
Vps53Q8CCB4 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Vps53Q8CCB4 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps53Q8CCB4 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps53Q8CCB4 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps53Q8CCB4 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Vps53Q8CCB4 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps53Q8CCB4 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vps53Q8CCB4 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps53Q8CCB4 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps53Q8CCB4 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Vps53Q8CCB4 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps53Q8CCB4 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps53Q8CCB4 Gm15897-201ENSMUST00000117770 1486 ntBASIC14.51□□□□□ -0.09
Vps53Q8CCB4 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps53Q8CCB4 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vps53Q8CCB4 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vps53Q8CCB4 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps53Q8CCB4 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps53Q8CCB4 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vps53Q8CCB4 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps53Q8CCB4 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.51□□□□□ -0.09
Vps53Q8CCB4 Gm10434-201ENSMUST00000101158 471 ntBASIC14.51□□□□□ -0.09
Vps53Q8CCB4 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vps53Q8CCB4 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps53Q8CCB4 Gm12363-201ENSMUST00000122250 668 ntBASIC14.51□□□□□ -0.09
Vps53Q8CCB4 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.51□□□□□ -0.09
Vps53Q8CCB4 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC14.51□□□□□ -0.09
Vps53Q8CCB4 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.51□□□□□ -0.09
Vps53Q8CCB4 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC14.51□□□□□ -0.09
Vps53Q8CCB4 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Vps53Q8CCB4 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms