Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Gm9062-201ENSMUST00000117712 727 ntBASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Gm25880-201ENSMUST00000104331 132 ntBASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Gm11340-201ENSMUST00000119226 412 ntBASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Gm20392-201ENSMUST00000173047 701 ntBASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Gm28882-201ENSMUST00000185504 314 ntBASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Gm10731-201ENSMUST00000181171 448 ntBASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Gm27530-201ENSMUST00000184096 98 ntBASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Gm28388-201ENSMUST00000186262 437 ntBASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a6Q8C6K9 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms