Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc60Q8C4J0 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc60Q8C4J0 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc60Q8C4J0 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc60Q8C4J0 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc60Q8C4J0 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc60Q8C4J0 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc60Q8C4J0 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc60Q8C4J0 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc60Q8C4J0 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc60Q8C4J0 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Ccdc60Q8C4J0 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc60Q8C4J0 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC15.88■□□□□ 0.13
Ccdc60Q8C4J0 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc60Q8C4J0 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc60Q8C4J0 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc60Q8C4J0 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc60Q8C4J0 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc60Q8C4J0 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc60Q8C4J0 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Ccdc60Q8C4J0 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC15.88■□□□□ 0.13
Ccdc60Q8C4J0 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC15.88■□□□□ 0.13
Ccdc60Q8C4J0 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc60Q8C4J0 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC15.88■□□□□ 0.13
Ccdc60Q8C4J0 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC15.88■□□□□ 0.13
Ccdc60Q8C4J0 Gm26956-201ENSMUST00000182176 986 ntBASIC15.88■□□□□ 0.13
Ccdc60Q8C4J0 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC15.88■□□□□ 0.13
Ccdc60Q8C4J0 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc60Q8C4J0 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc60Q8C4J0 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc60Q8C4J0 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc60Q8C4J0 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc60Q8C4J0 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc60Q8C4J0 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc60Q8C4J0 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc60Q8C4J0 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC15.88■□□□□ 0.13
Ccdc60Q8C4J0 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Ccdc60Q8C4J0 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc60Q8C4J0 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC15.88■□□□□ 0.13
Ccdc60Q8C4J0 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc60Q8C4J0 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc60Q8C4J0 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc60Q8C4J0 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Ccdc60Q8C4J0 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc60Q8C4J0 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc60Q8C4J0 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc60Q8C4J0 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc60Q8C4J0 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc60Q8C4J0 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc60Q8C4J0 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc60Q8C4J0 Gm4864-201ENSMUST00000219894 1461 ntBASIC15.87■□□□□ 0.13
Ccdc60Q8C4J0 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc60Q8C4J0 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc60Q8C4J0 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Ccdc60Q8C4J0 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC15.87■□□□□ 0.13
Ccdc60Q8C4J0 Gm24845-201ENSMUST00000158034 109 ntBASIC15.87■□□□□ 0.13
Ccdc60Q8C4J0 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC15.87■□□□□ 0.13
Ccdc60Q8C4J0 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC15.87■□□□□ 0.13
Ccdc60Q8C4J0 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc60Q8C4J0 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Ccdc60Q8C4J0 Gm43758-201ENSMUST00000199500 367 ntBASIC15.87■□□□□ 0.13
Ccdc60Q8C4J0 Gm43822-201ENSMUST00000200285 476 ntBASIC15.87■□□□□ 0.13
Ccdc60Q8C4J0 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc60Q8C4J0 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC15.87■□□□□ 0.13
Ccdc60Q8C4J0 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc60Q8C4J0 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC15.87■□□□□ 0.13
Ccdc60Q8C4J0 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Ccdc60Q8C4J0 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC15.87■□□□□ 0.13
Ccdc60Q8C4J0 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Gm11222-201ENSMUST00000119005 738 ntBASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Gm28882-201ENSMUST00000185504 314 ntBASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Gm21769-201ENSMUST00000211922 111 ntBASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms