Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 AC113082.1-201ENSMUST00000217324 327 ntBASIC16.44■□□□□ 0.22
Cps1Q8C196 Gm9111-201ENSMUST00000219394 709 ntBASIC16.44■□□□□ 0.22
Cps1Q8C196 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cps1Q8C196 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Cps1Q8C196 Gm8325-201ENSMUST00000099086 453 ntBASIC16.44■□□□□ 0.22
Cps1Q8C196 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cps1Q8C196 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cps1Q8C196 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cps1Q8C196 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cps1Q8C196 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cps1Q8C196 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cps1Q8C196 Gm45266-201ENSMUST00000210111 2173 ntBASIC16.43■□□□□ 0.22
Cps1Q8C196 AC241621.2-201ENSMUST00000223991 2151 ntBASIC16.43■□□□□ 0.22
Cps1Q8C196 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Cps1Q8C196 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cps1Q8C196 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cps1Q8C196 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cps1Q8C196 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cps1Q8C196 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cps1Q8C196 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cps1Q8C196 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Cps1Q8C196 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC16.43■□□□□ 0.22
Cps1Q8C196 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cps1Q8C196 Gm22442-201ENSMUST00000157256 144 ntBASIC16.43■□□□□ 0.22
Cps1Q8C196 Gm28937-201ENSMUST00000185413 695 ntBASIC16.43■□□□□ 0.22
Cps1Q8C196 Gm29400-201ENSMUST00000187208 695 ntBASIC16.43■□□□□ 0.22
Cps1Q8C196 Gm28662-201ENSMUST00000188446 695 ntBASIC16.43■□□□□ 0.22
Cps1Q8C196 Gm28251-201ENSMUST00000188835 695 ntBASIC16.43■□□□□ 0.22
Cps1Q8C196 Gm37981-201ENSMUST00000194280 535 ntBASIC16.43■□□□□ 0.22
Cps1Q8C196 Gm37318-201ENSMUST00000194325 695 ntBASIC16.43■□□□□ 0.22
Cps1Q8C196 Gm38017-201ENSMUST00000194768 695 ntBASIC16.43■□□□□ 0.22
Cps1Q8C196 Gm37287-201ENSMUST00000195449 695 ntBASIC16.43■□□□□ 0.22
Cps1Q8C196 Gm37793-201ENSMUST00000195548 695 ntBASIC16.43■□□□□ 0.22
Cps1Q8C196 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Cps1Q8C196 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Cps1Q8C196 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cps1Q8C196 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cps1Q8C196 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cps1Q8C196 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cps1Q8C196 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cps1Q8C196 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cps1Q8C196 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.43■□□□□ 0.22
Cps1Q8C196 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cps1Q8C196 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Cps1Q8C196 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cps1Q8C196 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cps1Q8C196 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.42■□□□□ 0.22
Cps1Q8C196 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cps1Q8C196 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC16.42■□□□□ 0.22
Cps1Q8C196 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cps1Q8C196 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cps1Q8C196 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cps1Q8C196 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cps1Q8C196 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cps1Q8C196 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cps1Q8C196 Gm13600-201ENSMUST00000117949 744 ntBASIC16.42■□□□□ 0.22
Cps1Q8C196 Gm11783-201ENSMUST00000119549 885 ntBASIC16.42■□□□□ 0.22
Cps1Q8C196 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cps1Q8C196 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cps1Q8C196 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC16.42■□□□□ 0.22
Cps1Q8C196 Gm3017-201ENSMUST00000203603 1126 ntBASIC16.42■□□□□ 0.22
Cps1Q8C196 Gm45594-201ENSMUST00000211717 241 ntBASIC16.42■□□□□ 0.22
Cps1Q8C196 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC16.42■□□□□ 0.22
Cps1Q8C196 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cps1Q8C196 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cps1Q8C196 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC16.42■□□□□ 0.22
Cps1Q8C196 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Cps1Q8C196 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
Cps1Q8C196 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cps1Q8C196 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Cps1Q8C196 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cps1Q8C196 AC166836.1-201ENSMUST00000219933 1795 ntBASIC16.42■□□□□ 0.22
Cps1Q8C196 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cps1Q8C196 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Cps1Q8C196 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC16.42■□□□□ 0.22
Cps1Q8C196 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cps1Q8C196 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cps1Q8C196 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC16.42■□□□□ 0.22
Cps1Q8C196 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cps1Q8C196 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cps1Q8C196 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC16.41■□□□□ 0.22
Cps1Q8C196 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Cps1Q8C196 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cps1Q8C196 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cps1Q8C196 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cps1Q8C196 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Cps1Q8C196 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cps1Q8C196 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC16.41■□□□□ 0.22
Cps1Q8C196 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cps1Q8C196 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Cps1Q8C196 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cps1Q8C196 Gm11801-201ENSMUST00000117807 746 ntBASIC16.41■□□□□ 0.22
Cps1Q8C196 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC16.41■□□□□ 0.22
Cps1Q8C196 Gm25951-201ENSMUST00000175330 64 ntBASIC16.41■□□□□ 0.22
Cps1Q8C196 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cps1Q8C196 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC16.41■□□□□ 0.22
Cps1Q8C196 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Cps1Q8C196 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cps1Q8C196 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cps1Q8C196 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms