Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gm37437-201ENSMUST00000194451 1937 ntBASIC13□□□□□ -0.33
Sh3rf3Q8C120 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13□□□□□ -0.33
Sh3rf3Q8C120 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh3rf3Q8C120 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Gm12957-201ENSMUST00000117835 377 ntBASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Gm16379-201ENSMUST00000161469 348 ntBASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Gm8762-201ENSMUST00000193486 339 ntBASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Gm38158-201ENSMUST00000194617 339 ntBASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sh3rf3Q8C120 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf3Q8C120 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf3Q8C120 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.98□□□□□ -0.33
Sh3rf3Q8C120 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sh3rf3Q8C120 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf3Q8C120 Gm13315-201ENSMUST00000120376 991 ntBASIC12.98□□□□□ -0.33
Sh3rf3Q8C120 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf3Q8C120 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.98□□□□□ -0.33
Sh3rf3Q8C120 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.98□□□□□ -0.33
Sh3rf3Q8C120 Gm8062-201ENSMUST00000139696 444 ntBASIC12.98□□□□□ -0.33
Sh3rf3Q8C120 Gm13316-201ENSMUST00000140537 691 ntBASIC12.98□□□□□ -0.33
Sh3rf3Q8C120 Rmrp-201ENSMUST00000157463 271 ntBASIC12.98□□□□□ -0.33
Sh3rf3Q8C120 Gm9022-201ENSMUST00000182482 992 ntBASIC12.98□□□□□ -0.33
Sh3rf3Q8C120 Gm19184-201ENSMUST00000196798 928 ntBASIC12.98□□□□□ -0.33
Sh3rf3Q8C120 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.98□□□□□ -0.33
Sh3rf3Q8C120 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.98□□□□□ -0.33
Sh3rf3Q8C120 Gm5781-201ENSMUST00000219792 443 ntBASIC12.98□□□□□ -0.33
Sh3rf3Q8C120 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.98□□□□□ -0.33
Sh3rf3Q8C120 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.98□□□□□ -0.33
Sh3rf3Q8C120 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf3Q8C120 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.98□□□□□ -0.33
Sh3rf3Q8C120 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf3Q8C120 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf3Q8C120 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf3Q8C120 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Sh3rf3Q8C120 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf3Q8C120 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf3Q8C120 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sh3rf3Q8C120 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf3Q8C120 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf3Q8C120 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.97□□□□□ -0.33
Sh3rf3Q8C120 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf3Q8C120 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.97□□□□□ -0.33
Sh3rf3Q8C120 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf3Q8C120 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.97□□□□□ -0.33
Sh3rf3Q8C120 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf3Q8C120 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf3Q8C120 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
Sh3rf3Q8C120 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf3Q8C120 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf3Q8C120 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf3Q8C120 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf3Q8C120 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.97□□□□□ -0.33
Sh3rf3Q8C120 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf3Q8C120 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf3Q8C120 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf3Q8C120 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf3Q8C120 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Sh3rf3Q8C120 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf3Q8C120 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf3Q8C120 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf3Q8C120 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf3Q8C120 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.97□□□□□ -0.33
Sh3rf3Q8C120 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms