Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Usp40Q8BWR4 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp40Q8BWR4 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp40Q8BWR4 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Usp40Q8BWR4 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Usp40Q8BWR4 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Usp40Q8BWR4 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Usp40Q8BWR4 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Usp40Q8BWR4 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Usp40Q8BWR4 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp40Q8BWR4 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC17.02■□□□□ 0.32
Usp40Q8BWR4 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp40Q8BWR4 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC17.02■□□□□ 0.32
Usp40Q8BWR4 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC17.02■□□□□ 0.32
Usp40Q8BWR4 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC17.02■□□□□ 0.32
Usp40Q8BWR4 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp40Q8BWR4 Gm24514-201ENSMUST00000174961 285 ntBASIC17.02■□□□□ 0.32
Usp40Q8BWR4 Gm5732-201ENSMUST00000182596 1007 ntBASIC17.02■□□□□ 0.32
Usp40Q8BWR4 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC17.02■□□□□ 0.32
Usp40Q8BWR4 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Usp40Q8BWR4 Gm4607-201ENSMUST00000206649 577 ntBASIC17.02■□□□□ 0.32
Usp40Q8BWR4 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Usp40Q8BWR4 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Usp40Q8BWR4 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp40Q8BWR4 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp40Q8BWR4 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp40Q8BWR4 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp40Q8BWR4 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Usp40Q8BWR4 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Usp40Q8BWR4 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp40Q8BWR4 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp40Q8BWR4 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Usp40Q8BWR4 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp40Q8BWR4 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC17.02■□□□□ 0.31
Usp40Q8BWR4 Gm5847-201ENSMUST00000178959 1595 ntBASIC17.02■□□□□ 0.31
Usp40Q8BWR4 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp40Q8BWR4 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp40Q8BWR4 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp40Q8BWR4 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp40Q8BWR4 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Usp40Q8BWR4 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp40Q8BWR4 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp40Q8BWR4 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp40Q8BWR4 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp40Q8BWR4 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp40Q8BWR4 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp40Q8BWR4 Gm13035-201ENSMUST00000117496 342 ntBASIC17.01■□□□□ 0.31
Usp40Q8BWR4 Gm13045-201ENSMUST00000119019 712 ntBASIC17.01■□□□□ 0.31
Usp40Q8BWR4 Gm6506-201ENSMUST00000119775 1136 ntBASIC17.01■□□□□ 0.31
Usp40Q8BWR4 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp40Q8BWR4 Mir1943-201ENSMUST00000158276 73 ntBASIC17.01■□□□□ 0.31
Usp40Q8BWR4 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC17.01■□□□□ 0.31
Usp40Q8BWR4 Gm19353-201ENSMUST00000184561 445 ntBASIC17.01■□□□□ 0.31
Usp40Q8BWR4 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp40Q8BWR4 Gm7207-201ENSMUST00000211575 1067 ntBASIC17.01■□□□□ 0.31
Usp40Q8BWR4 Mir219a-1-201ENSMUST00000083621 110 ntBASIC17.01■□□□□ 0.31
Usp40Q8BWR4 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp40Q8BWR4 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Usp40Q8BWR4 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp40Q8BWR4 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp40Q8BWR4 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp40Q8BWR4 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp40Q8BWR4 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp40Q8BWR4 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC17■□□□□ 0.31
Usp40Q8BWR4 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Usp40Q8BWR4 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp40Q8BWR4 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC17■□□□□ 0.31
Usp40Q8BWR4 Gm28719-201ENSMUST00000187779 1757 ntBASIC17■□□□□ 0.31
Usp40Q8BWR4 Gm44942-201ENSMUST00000096093 2072 ntBASIC17■□□□□ 0.31
Usp40Q8BWR4 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp40Q8BWR4 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp40Q8BWR4 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
Usp40Q8BWR4 Gm23596-201ENSMUST00000104304 132 ntBASIC17■□□□□ 0.31
Usp40Q8BWR4 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC17■□□□□ 0.31
Usp40Q8BWR4 Gm14058-201ENSMUST00000116082 735 ntBASIC17■□□□□ 0.31
Usp40Q8BWR4 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp40Q8BWR4 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Usp40Q8BWR4 H2-Q3-201ENSMUST00000172583 608 ntBASIC17■□□□□ 0.31
Usp40Q8BWR4 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC17■□□□□ 0.31
Usp40Q8BWR4 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC17■□□□□ 0.31
Usp40Q8BWR4 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC17■□□□□ 0.31
Usp40Q8BWR4 Gm9211-201ENSMUST00000182882 975 ntBASIC17■□□□□ 0.31
Usp40Q8BWR4 Mir7677-201ENSMUST00000184226 67 ntBASIC17■□□□□ 0.31
Usp40Q8BWR4 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC17■□□□□ 0.31
Usp40Q8BWR4 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC17■□□□□ 0.31
Usp40Q8BWR4 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC17■□□□□ 0.31
Usp40Q8BWR4 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Usp40Q8BWR4 AC133602.1-201ENSMUST00000227510 509 ntBASIC17■□□□□ 0.31
Usp40Q8BWR4 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp40Q8BWR4 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp40Q8BWR4 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp40Q8BWR4 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC17■□□□□ 0.31
Usp40Q8BWR4 Gm21811-201ENSMUST00000096485 930 ntBASIC17■□□□□ 0.31
Usp40Q8BWR4 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp40Q8BWR4 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp40Q8BWR4 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Usp40Q8BWR4 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp40Q8BWR4 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp40Q8BWR4 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Usp40Q8BWR4 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms