Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup54Q8BTS4 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.76□□□□□ -0.37
Nup54Q8BTS4 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup54Q8BTS4 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.76□□□□□ -0.37
Nup54Q8BTS4 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup54Q8BTS4 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.76□□□□□ -0.37
Nup54Q8BTS4 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nup54Q8BTS4 Gm14109-201ENSMUST00000118814 309 ntBASIC12.76□□□□□ -0.37
Nup54Q8BTS4 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.76□□□□□ -0.37
Nup54Q8BTS4 Gm25668-201ENSMUST00000157700 129 ntBASIC12.76□□□□□ -0.37
Nup54Q8BTS4 Gm27046-201ENSMUST00000182160 463 ntBASIC12.76□□□□□ -0.37
Nup54Q8BTS4 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.76□□□□□ -0.37
Nup54Q8BTS4 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.76□□□□□ -0.37
Nup54Q8BTS4 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.76□□□□□ -0.37
Nup54Q8BTS4 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup54Q8BTS4 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nup54Q8BTS4 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.76□□□□□ -0.37
Nup54Q8BTS4 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup54Q8BTS4 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Nup54Q8BTS4 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nup54Q8BTS4 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.76□□□□□ -0.37
Nup54Q8BTS4 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nup54Q8BTS4 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.76□□□□□ -0.37
Nup54Q8BTS4 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup54Q8BTS4 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup54Q8BTS4 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup54Q8BTS4 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.76□□□□□ -0.37
Nup54Q8BTS4 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Nup54Q8BTS4 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup54Q8BTS4 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup54Q8BTS4 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Nup54Q8BTS4 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.75□□□□□ -0.37
Nup54Q8BTS4 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup54Q8BTS4 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup54Q8BTS4 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup54Q8BTS4 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup54Q8BTS4 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nup54Q8BTS4 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nup54Q8BTS4 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nup54Q8BTS4 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.75□□□□□ -0.37
Nup54Q8BTS4 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nup54Q8BTS4 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.75□□□□□ -0.37
Nup54Q8BTS4 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup54Q8BTS4 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nup54Q8BTS4 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nup54Q8BTS4 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.75□□□□□ -0.37
Nup54Q8BTS4 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.75□□□□□ -0.37
Nup54Q8BTS4 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup54Q8BTS4 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.75□□□□□ -0.37
Nup54Q8BTS4 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.75□□□□□ -0.37
Nup54Q8BTS4 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Nup54Q8BTS4 Gm6082-201ENSMUST00000215204 454 ntBASIC12.75□□□□□ -0.37
Nup54Q8BTS4 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.75□□□□□ -0.37
Nup54Q8BTS4 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup54Q8BTS4 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup54Q8BTS4 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup54Q8BTS4 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup54Q8BTS4 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup54Q8BTS4 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup54Q8BTS4 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup54Q8BTS4 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup54Q8BTS4 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nup54Q8BTS4 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nup54Q8BTS4 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup54Q8BTS4 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nup54Q8BTS4 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup54Q8BTS4 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Nup54Q8BTS4 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup54Q8BTS4 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Nup54Q8BTS4 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup54Q8BTS4 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup54Q8BTS4 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Nup54Q8BTS4 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup54Q8BTS4 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.74□□□□□ -0.37
Nup54Q8BTS4 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nup54Q8BTS4 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.74□□□□□ -0.37
Nup54Q8BTS4 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup54Q8BTS4 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Nup54Q8BTS4 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.74□□□□□ -0.37
Nup54Q8BTS4 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup54Q8BTS4 Gm13097-201ENSMUST00000210722 397 ntBASIC12.74□□□□□ -0.37
Nup54Q8BTS4 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup54Q8BTS4 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Nup54Q8BTS4 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Nup54Q8BTS4 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup54Q8BTS4 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup54Q8BTS4 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup54Q8BTS4 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup54Q8BTS4 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Nup54Q8BTS4 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup54Q8BTS4 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup54Q8BTS4 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup54Q8BTS4 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup54Q8BTS4 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup54Q8BTS4 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Nup54Q8BTS4 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.73□□□□□ -0.37
Nup54Q8BTS4 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nup54Q8BTS4 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nup54Q8BTS4 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nup54Q8BTS4 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms