Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Gm27618-201ENSMUST00000183671 60 ntBASIC10.26□□□□□ -0.77
Smco3Q8BQM7 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Gm6458-201ENSMUST00000211573 635 ntBASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Rn7sk-201ENSMUST00000083103 331 ntBASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Gm26315-201ENSMUST00000083890 321 ntBASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Fgf17-202ENSMUST00000227123 1336 ntBASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco3Q8BQM7 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Gm15376-201ENSMUST00000122258 783 ntBASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Gm19184-201ENSMUST00000196798 928 ntBASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Gm2213-201ENSMUST00000197485 688 ntBASIC10.25□□□□□ -0.77
Smco3Q8BQM7 AW822252-206ENSMUST00000208904 237 ntBASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms