Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Gm13297-201ENSMUST00000120205 934 ntBASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Mir8109-201ENSMUST00000184375 117 ntBASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Gm7046-201ENSMUST00000221351 977 ntBASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Gm22058-201ENSMUST00000083393 310 ntBASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Gm3287-205ENSMUST00000228893 1332 ntBASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Srrm4Q8BKA3 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Srrm4Q8BKA3 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms