Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Gm23119-201ENSMUST00000158610 140 ntBASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Gm3508-201ENSMUST00000186012 792 ntBASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Gm270-201ENSMUST00000223010 976 ntBASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcal1Q8BJL0 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Gm13408-201ENSMUST00000119822 798 ntBASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Gm11941-201ENSMUST00000119904 610 ntBASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Gm13935-201ENSMUST00000121859 798 ntBASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Gm10702-201ENSMUST00000098929 1268 ntBASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcal1Q8BJL0 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Gm9022-201ENSMUST00000182482 992 ntBASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Mir7677-201ENSMUST00000184226 67 ntBASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Ighv4-2-201ENSMUST00000192975 362 ntBASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Gm43962-201ENSMUST00000203898 190 ntBASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Smarcal1Q8BJL0 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms