Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.77□□□□□ -0.53
Clrn3Q8BHH8 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn3Q8BHH8 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn3Q8BHH8 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn3Q8BHH8 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn3Q8BHH8 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn3Q8BHH8 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.77□□□□□ -0.53
Clrn3Q8BHH8 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn3Q8BHH8 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn3Q8BHH8 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn3Q8BHH8 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn3Q8BHH8 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.77□□□□□ -0.53
Clrn3Q8BHH8 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn3Q8BHH8 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Clrn3Q8BHH8 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn3Q8BHH8 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn3Q8BHH8 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn3Q8BHH8 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn3Q8BHH8 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Clrn3Q8BHH8 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 Snord83b-201ENSMUST00000104546 94 ntBASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 Gm13492-201ENSMUST00000119772 665 ntBASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 Gm14660-201ENSMUST00000119809 575 ntBASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 Gm16379-201ENSMUST00000161469 348 ntBASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 Gm8762-201ENSMUST00000193486 339 ntBASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 Gm24526-201ENSMUST00000082921 158 ntBASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clrn3Q8BHH8 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Snora78-201ENSMUST00000158630 128 ntBASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms