Protein–RNA interactions for Protein: Q8BGA5

Krr1, KRR1 small subunit processome component homolog, mousemouse

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krr1Q8BGA5 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krr1Q8BGA5 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Gm13612-201ENSMUST00000119276 390 ntBASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Gm11918-201ENSMUST00000121660 179 ntBASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Krr1Q8BGA5 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Gm45384-201ENSMUST00000210451 277 ntBASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Gm9908-201ENSMUST00000211534 448 ntBASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Krr1Q8BGA5 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Krr1Q8BGA5 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.83□□□□□ -0.51
Krr1Q8BGA5 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Krr1Q8BGA5 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Krr1Q8BGA5 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Krr1Q8BGA5 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Mir686-201ENSMUST00000102174 109 ntBASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Gm11618-201ENSMUST00000117946 267 ntBASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Gm28693-202ENSMUST00000190758 331 ntBASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Krr1Q8BGA5 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Krr1Q8BGA5 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Krr1Q8BGA5 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Krr1Q8BGA5 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Krr1Q8BGA5 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.82□□□□□ -0.52
Krr1Q8BGA5 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
Krr1Q8BGA5 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.82□□□□□ -0.52
Krr1Q8BGA5 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
Krr1Q8BGA5 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Krr1Q8BGA5 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Krr1Q8BGA5 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Krr1Q8BGA5 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms