Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubp1Q811S7 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubp1Q811S7 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ubp1Q811S7 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Ubp1Q811S7 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ubp1Q811S7 Rubie-203ENSMUST00000227803 2430 ntBASIC12.35□□□□□ -0.43
Ubp1Q811S7 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubp1Q811S7 Gm43221-201ENSMUST00000197612 2071 ntBASIC12.34□□□□□ -0.43
Ubp1Q811S7 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Mir1247-201ENSMUST00000116706 82 ntBASIC12.34□□□□□ -0.43
Ubp1Q811S7 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.34□□□□□ -0.43
Ubp1Q811S7 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Mospd4-201ENSMUST00000180618 576 ntBASIC12.34□□□□□ -0.43
Ubp1Q811S7 Gm27501-201ENSMUST00000183599 107 ntBASIC12.34□□□□□ -0.43
Ubp1Q811S7 Gm27516-201ENSMUST00000184237 98 ntBASIC12.34□□□□□ -0.43
Ubp1Q811S7 Gm44405-201ENSMUST00000198952 126 ntBASIC12.34□□□□□ -0.43
Ubp1Q811S7 Olfr284-202ENSMUST00000206647 966 ntBASIC12.34□□□□□ -0.43
Ubp1Q811S7 Gm18935-201ENSMUST00000212692 664 ntBASIC12.34□□□□□ -0.43
Ubp1Q811S7 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.34□□□□□ -0.43
Ubp1Q811S7 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.34□□□□□ -0.43
Ubp1Q811S7 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubp1Q811S7 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubp1Q811S7 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ubp1Q811S7 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ubp1Q811S7 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.33□□□□□ -0.44
Ubp1Q811S7 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.33□□□□□ -0.44
Ubp1Q811S7 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubp1Q811S7 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.33□□□□□ -0.44
Ubp1Q811S7 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Gm15370-201ENSMUST00000117158 253 ntBASIC12.33□□□□□ -0.44
Ubp1Q811S7 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Mir1938-201ENSMUST00000158746 100 ntBASIC12.33□□□□□ -0.44
Ubp1Q811S7 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Gm29396-201ENSMUST00000185659 716 ntBASIC12.33□□□□□ -0.44
Ubp1Q811S7 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.33□□□□□ -0.44
Ubp1Q811S7 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Gm45930-201ENSMUST00000221330 292 ntBASIC12.33□□□□□ -0.44
Ubp1Q811S7 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 277.1 ms