Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lrrtm4Q80XG9 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lrrtm4Q80XG9 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lrrtm4Q80XG9 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lrrtm4Q80XG9 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.15□□□□□ -0.46
Lrrtm4Q80XG9 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lrrtm4Q80XG9 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.15□□□□□ -0.47
Lrrtm4Q80XG9 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Lrrtm4Q80XG9 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Lrrtm4Q80XG9 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Lrrtm4Q80XG9 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Lrrtm4Q80XG9 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Lrrtm4Q80XG9 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Gm9083-201ENSMUST00000120423 819 ntBASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Gm44958-201ENSMUST00000203734 736 ntBASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrtm4Q80XG9 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrtm4Q80XG9 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrtm4Q80XG9 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrtm4Q80XG9 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrtm4Q80XG9 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.13□□□□□ -0.47
Lrrtm4Q80XG9 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Lrrtm4Q80XG9 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrtm4Q80XG9 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrtm4Q80XG9 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Lrrtm4Q80XG9 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrtm4Q80XG9 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrtm4Q80XG9 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrtm4Q80XG9 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.13□□□□□ -0.47
Lrrtm4Q80XG9 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.13□□□□□ -0.47
Lrrtm4Q80XG9 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.13□□□□□ -0.47
Lrrtm4Q80XG9 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrtm4Q80XG9 Gm15276-201ENSMUST00000145953 498 ntBASIC12.13□□□□□ -0.47
Lrrtm4Q80XG9 Gm23119-201ENSMUST00000158610 140 ntBASIC12.13□□□□□ -0.47
Lrrtm4Q80XG9 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Lrrtm4Q80XG9 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrtm4Q80XG9 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.13□□□□□ -0.47
Lrrtm4Q80XG9 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Lrrtm4Q80XG9 Gm42937-201ENSMUST00000197360 752 ntBASIC12.13□□□□□ -0.47
Lrrtm4Q80XG9 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.13□□□□□ -0.47
Lrrtm4Q80XG9 Gm13097-201ENSMUST00000210722 397 ntBASIC12.13□□□□□ -0.47
Lrrtm4Q80XG9 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Lrrtm4Q80XG9 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.13□□□□□ -0.47
Lrrtm4Q80XG9 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrtm4Q80XG9 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Lrrtm4Q80XG9 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrtm4Q80XG9 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrtm4Q80XG9 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.13□□□□□ -0.47
Lrrtm4Q80XG9 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrtm4Q80XG9 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.13□□□□□ -0.47
Lrrtm4Q80XG9 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms