Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh19Q80TF3 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Gm39404-201ENSMUST00000216350 313 ntBASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.26□□□□□ -0.45
Pcdh19Q80TF3 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Gm14832-201ENSMUST00000121289 322 ntBASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms