Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubfd1Q78JW9 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Gm14644-201ENSMUST00000116671 647 ntBASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Gm45598-202ENSMUST00000210719 986 ntBASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Gm26035-201ENSMUST00000083065 308 ntBASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubfd1Q78JW9 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubfd1Q78JW9 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubfd1Q78JW9 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubfd1Q78JW9 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubfd1Q78JW9 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ubfd1Q78JW9 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubfd1Q78JW9 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.16□□□□□ -0.46
Ubfd1Q78JW9 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.16□□□□□ -0.46
Ubfd1Q78JW9 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubfd1Q78JW9 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubfd1Q78JW9 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubfd1Q78JW9 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubfd1Q78JW9 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.16□□□□□ -0.46
Ubfd1Q78JW9 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubfd1Q78JW9 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubfd1Q78JW9 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.16□□□□□ -0.46
Ubfd1Q78JW9 Gm13996-201ENSMUST00000118456 430 ntBASIC12.16□□□□□ -0.46
Ubfd1Q78JW9 Gm23119-201ENSMUST00000158610 140 ntBASIC12.16□□□□□ -0.46
Ubfd1Q78JW9 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubfd1Q78JW9 Gm9230-201ENSMUST00000188228 532 ntBASIC12.16□□□□□ -0.46
Ubfd1Q78JW9 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.16□□□□□ -0.46
Ubfd1Q78JW9 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ubfd1Q78JW9 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubfd1Q78JW9 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubfd1Q78JW9 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubfd1Q78JW9 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Ubfd1Q78JW9 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubfd1Q78JW9 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubfd1Q78JW9 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubfd1Q78JW9 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubfd1Q78JW9 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.16□□□□□ -0.46
Ubfd1Q78JW9 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.16□□□□□ -0.46
Ubfd1Q78JW9 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ubfd1Q78JW9 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ubfd1Q78JW9 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubfd1Q78JW9 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubfd1Q78JW9 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.15□□□□□ -0.46
Ubfd1Q78JW9 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ubfd1Q78JW9 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ubfd1Q78JW9 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.15□□□□□ -0.46
Ubfd1Q78JW9 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubfd1Q78JW9 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubfd1Q78JW9 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ubfd1Q78JW9 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubfd1Q78JW9 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubfd1Q78JW9 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.15□□□□□ -0.46
Ubfd1Q78JW9 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
Ubfd1Q78JW9 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubfd1Q78JW9 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.15□□□□□ -0.46
Ubfd1Q78JW9 Gm14760-201ENSMUST00000121831 999 ntBASIC12.15□□□□□ -0.46
Ubfd1Q78JW9 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ubfd1Q78JW9 Gm24990-201ENSMUST00000157406 323 ntBASIC12.15□□□□□ -0.46
Ubfd1Q78JW9 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ubfd1Q78JW9 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.15□□□□□ -0.46
Ubfd1Q78JW9 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Ubfd1Q78JW9 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms