Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx55Q6ZPL9 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx55Q6ZPL9 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC14.14□□□□□ -0.15
Ddx55Q6ZPL9 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx55Q6ZPL9 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx55Q6ZPL9 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx55Q6ZPL9 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx55Q6ZPL9 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx55Q6ZPL9 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx55Q6ZPL9 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx55Q6ZPL9 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx55Q6ZPL9 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC14.14□□□□□ -0.15
Ddx55Q6ZPL9 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx55Q6ZPL9 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.14□□□□□ -0.15
Ddx55Q6ZPL9 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 AC169511.2-201ENSMUST00000226674 2063 ntBASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Gm11892-201ENSMUST00000117711 1202 ntBASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Gm11675-201ENSMUST00000121873 832 ntBASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Gm4726-201ENSMUST00000135604 736 ntBASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Gm6019-201ENSMUST00000148369 736 ntBASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Gm22138-201ENSMUST00000158748 128 ntBASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx55Q6ZPL9 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx55Q6ZPL9 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx55Q6ZPL9 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx55Q6ZPL9 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx55Q6ZPL9 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx55Q6ZPL9 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ddx55Q6ZPL9 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx55Q6ZPL9 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx55Q6ZPL9 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx55Q6ZPL9 Gm11246-201ENSMUST00000120880 345 ntBASIC14.12□□□□□ -0.15
Ddx55Q6ZPL9 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC14.12□□□□□ -0.15
Ddx55Q6ZPL9 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Ddx55Q6ZPL9 Gm29155-201ENSMUST00000185910 269 ntBASIC14.12□□□□□ -0.15
Ddx55Q6ZPL9 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx55Q6ZPL9 Gm34023-201ENSMUST00000195539 217 ntBASIC14.12□□□□□ -0.15
Ddx55Q6ZPL9 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx55Q6ZPL9 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ddx55Q6ZPL9 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx55Q6ZPL9 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Ddx55Q6ZPL9 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx55Q6ZPL9 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx55Q6ZPL9 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ddx55Q6ZPL9 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx55Q6ZPL9 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx55Q6ZPL9 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Ddx55Q6ZPL9 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx55Q6ZPL9 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ddx55Q6ZPL9 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx55Q6ZPL9 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx55Q6ZPL9 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx55Q6ZPL9 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx55Q6ZPL9 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx55Q6ZPL9 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx55Q6ZPL9 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx55Q6ZPL9 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx55Q6ZPL9 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx55Q6ZPL9 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx55Q6ZPL9 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx55Q6ZPL9 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ddx55Q6ZPL9 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ddx55Q6ZPL9 Gm11956-201ENSMUST00000119525 512 ntBASIC14.11□□□□□ -0.15
Ddx55Q6ZPL9 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx55Q6ZPL9 Gm23153-201ENSMUST00000175323 313 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms