Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scaf4Q6PFF0 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scaf4Q6PFF0 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scaf4Q6PFF0 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scaf4Q6PFF0 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scaf4Q6PFF0 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scaf4Q6PFF0 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.28□□□□□ -0.44
Scaf4Q6PFF0 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scaf4Q6PFF0 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scaf4Q6PFF0 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scaf4Q6PFF0 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Scaf4Q6PFF0 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Scaf4Q6PFF0 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scaf4Q6PFF0 Gm37922-201ENSMUST00000195596 455 ntBASIC12.28□□□□□ -0.44
Scaf4Q6PFF0 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scaf4Q6PFF0 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.28□□□□□ -0.44
Scaf4Q6PFF0 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scaf4Q6PFF0 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.28□□□□□ -0.44
Scaf4Q6PFF0 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scaf4Q6PFF0 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scaf4Q6PFF0 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scaf4Q6PFF0 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.28□□□□□ -0.44
Scaf4Q6PFF0 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scaf4Q6PFF0 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scaf4Q6PFF0 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scaf4Q6PFF0 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scaf4Q6PFF0 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scaf4Q6PFF0 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scaf4Q6PFF0 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scaf4Q6PFF0 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scaf4Q6PFF0 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scaf4Q6PFF0 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.28□□□□□ -0.44
Scaf4Q6PFF0 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scaf4Q6PFF0 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.27□□□□□ -0.44
Scaf4Q6PFF0 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scaf4Q6PFF0 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scaf4Q6PFF0 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Scaf4Q6PFF0 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Scaf4Q6PFF0 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Scaf4Q6PFF0 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Scaf4Q6PFF0 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scaf4Q6PFF0 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Scaf4Q6PFF0 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scaf4Q6PFF0 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.27□□□□□ -0.44
Scaf4Q6PFF0 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.27□□□□□ -0.44
Scaf4Q6PFF0 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scaf4Q6PFF0 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scaf4Q6PFF0 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scaf4Q6PFF0 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.27□□□□□ -0.45
Scaf4Q6PFF0 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.27□□□□□ -0.45
Scaf4Q6PFF0 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scaf4Q6PFF0 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.27□□□□□ -0.45
Scaf4Q6PFF0 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Scaf4Q6PFF0 Gm10156-201ENSMUST00000122364 462 ntBASIC12.27□□□□□ -0.45
Scaf4Q6PFF0 Gm26185-201ENSMUST00000157692 266 ntBASIC12.27□□□□□ -0.45
Scaf4Q6PFF0 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scaf4Q6PFF0 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scaf4Q6PFF0 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.27□□□□□ -0.45
Scaf4Q6PFF0 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.27□□□□□ -0.45
Scaf4Q6PFF0 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.27□□□□□ -0.45
Scaf4Q6PFF0 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Scaf4Q6PFF0 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.27□□□□□ -0.45
Scaf4Q6PFF0 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scaf4Q6PFF0 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Scaf4Q6PFF0 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scaf4Q6PFF0 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Scaf4Q6PFF0 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scaf4Q6PFF0 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scaf4Q6PFF0 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.27□□□□□ -0.45
Scaf4Q6PFF0 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scaf4Q6PFF0 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scaf4Q6PFF0 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Scaf4Q6PFF0 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Scaf4Q6PFF0 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scaf4Q6PFF0 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scaf4Q6PFF0 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Scaf4Q6PFF0 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Scaf4Q6PFF0 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Rmrp-201ENSMUST00000157463 271 ntBASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Gm38671-201ENSMUST00000200573 130 ntBASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Gm44882-201ENSMUST00000205702 802 ntBASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms