Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smarca2Q6DIC0 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Smarca2Q6DIC0 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC21.3■■□□□ 1
Smarca2Q6DIC0 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC21.3■■□□□ 1
Smarca2Q6DIC0 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Smarca2Q6DIC0 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC21.29■■□□□ 1
Smarca2Q6DIC0 AC166836.1-201ENSMUST00000219933 1795 ntBASIC21.29■■□□□ 1
Smarca2Q6DIC0 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Smarca2Q6DIC0 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smarca2Q6DIC0 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smarca2Q6DIC0 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Smarca2Q6DIC0 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smarca2Q6DIC0 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smarca2Q6DIC0 Gm11783-201ENSMUST00000119549 885 ntBASIC21.29■■□□□ 1
Smarca2Q6DIC0 Gm13019-201ENSMUST00000120000 276 ntBASIC21.29■■□□□ 1
Smarca2Q6DIC0 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC21.29■■□□□ 1
Smarca2Q6DIC0 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC21.29■■□□□ 1
Smarca2Q6DIC0 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC21.29■■□□□ 1
Smarca2Q6DIC0 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smarca2Q6DIC0 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC21.29■■□□□ 1
Smarca2Q6DIC0 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smarca2Q6DIC0 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smarca2Q6DIC0 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Smarca2Q6DIC0 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Smarca2Q6DIC0 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC21.29■■□□□ 1
Smarca2Q6DIC0 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Smarca2Q6DIC0 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Smarca2Q6DIC0 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smarca2Q6DIC0 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Smarca2Q6DIC0 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Smarca2Q6DIC0 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC21.28■■□□□ 1
Smarca2Q6DIC0 Gm15003-201ENSMUST00000118884 446 ntBASIC21.28■■□□□ 1
Smarca2Q6DIC0 Gm20414-201ENSMUST00000172918 646 ntBASIC21.28■■□□□ 1
Smarca2Q6DIC0 Gm37981-201ENSMUST00000194280 535 ntBASIC21.28■■□□□ 1
Smarca2Q6DIC0 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC21.28■■□□□ 1
Smarca2Q6DIC0 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC21.28■■□□□ 1
Smarca2Q6DIC0 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC21.28■■□□□ 1
Smarca2Q6DIC0 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smarca2Q6DIC0 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Smarca2Q6DIC0 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Smarca2Q6DIC0 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smarca2Q6DIC0 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC21.28■■□□□ 1
Smarca2Q6DIC0 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC21.28■■□□□ 1
Smarca2Q6DIC0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Smarca2Q6DIC0 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smarca2Q6DIC0 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Smarca2Q6DIC0 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC21.27■■□□□ 1
Smarca2Q6DIC0 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Smarca2Q6DIC0 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC21.27■■□□□ 1
Smarca2Q6DIC0 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Smarca2Q6DIC0 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smarca2Q6DIC0 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smarca2Q6DIC0 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC21.27■■□□□ 1
Smarca2Q6DIC0 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Smarca2Q6DIC0 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smarca2Q6DIC0 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC21.27■■□□□ 1
Smarca2Q6DIC0 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smarca2Q6DIC0 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smarca2Q6DIC0 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC21.27■■□□□ 1
Smarca2Q6DIC0 Gm15610-201ENSMUST00000120584 195 ntBASIC21.27■□□□□ 0.99
Smarca2Q6DIC0 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC21.27■□□□□ 0.99
Smarca2Q6DIC0 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC21.27■□□□□ 0.99
Smarca2Q6DIC0 Gm43752-201ENSMUST00000198475 697 ntBASIC21.27■□□□□ 0.99
Smarca2Q6DIC0 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC21.27■□□□□ 0.99
Smarca2Q6DIC0 Gm18514-201ENSMUST00000218980 436 ntBASIC21.27■□□□□ 0.99
Smarca2Q6DIC0 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Smarca2Q6DIC0 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smarca2Q6DIC0 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Smarca2Q6DIC0 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC21.26■□□□□ 0.99
Smarca2Q6DIC0 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Smarca2Q6DIC0 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smarca2Q6DIC0 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smarca2Q6DIC0 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smarca2Q6DIC0 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC21.26■□□□□ 0.99
Smarca2Q6DIC0 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smarca2Q6DIC0 Gm19015-201ENSMUST00000184002 1189 ntBASIC21.26■□□□□ 0.99
Smarca2Q6DIC0 Gm6450-201ENSMUST00000200896 574 ntBASIC21.26■□□□□ 0.99
Smarca2Q6DIC0 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC21.26■□□□□ 0.99
Smarca2Q6DIC0 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Smarca2Q6DIC0 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smarca2Q6DIC0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Smarca2Q6DIC0 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smarca2Q6DIC0 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC21.26■□□□□ 0.99
Smarca2Q6DIC0 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smarca2Q6DIC0 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smarca2Q6DIC0 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smarca2Q6DIC0 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Smarca2Q6DIC0 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smarca2Q6DIC0 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smarca2Q6DIC0 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Smarca2Q6DIC0 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smarca2Q6DIC0 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Smarca2Q6DIC0 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smarca2Q6DIC0 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC21.25■□□□□ 0.99
Smarca2Q6DIC0 Gm42433-201ENSMUST00000196806 940 ntBASIC21.25■□□□□ 0.99
Smarca2Q6DIC0 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC21.25■□□□□ 0.99
Smarca2Q6DIC0 Gm44414-201ENSMUST00000203660 2109 ntBASIC21.25■□□□□ 0.99
Smarca2Q6DIC0 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Smarca2Q6DIC0 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC21.25■□□□□ 0.99
Smarca2Q6DIC0 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms