Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sdc3Q64519 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Sdc3Q64519 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sdc3Q64519 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sdc3Q64519 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sdc3Q64519 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sdc3Q64519 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sdc3Q64519 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sdc3Q64519 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sdc3Q64519 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sdc3Q64519 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sdc3Q64519 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sdc3Q64519 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sdc3Q64519 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sdc3Q64519 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sdc3Q64519 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sdc3Q64519 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.03□□□□□ -0.48
Sdc3Q64519 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.03□□□□□ -0.48
Sdc3Q64519 Gm38241-201ENSMUST00000192641 898 ntBASIC12.03□□□□□ -0.48
Sdc3Q64519 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sdc3Q64519 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sdc3Q64519 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.03□□□□□ -0.48
Sdc3Q64519 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sdc3Q64519 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sdc3Q64519 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sdc3Q64519 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sdc3Q64519 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sdc3Q64519 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Sdc3Q64519 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sdc3Q64519 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.03□□□□□ -0.48
Sdc3Q64519 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sdc3Q64519 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sdc3Q64519 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sdc3Q64519 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sdc3Q64519 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sdc3Q64519 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sdc3Q64519 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sdc3Q64519 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sdc3Q64519 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sdc3Q64519 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sdc3Q64519 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sdc3Q64519 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sdc3Q64519 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sdc3Q64519 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sdc3Q64519 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sdc3Q64519 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sdc3Q64519 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sdc3Q64519 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sdc3Q64519 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sdc3Q64519 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.48
Sdc3Q64519 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.02□□□□□ -0.48
Sdc3Q64519 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sdc3Q64519 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sdc3Q64519 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.02□□□□□ -0.49
Sdc3Q64519 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Sdc3Q64519 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sdc3Q64519 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Sdc3Q64519 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.02□□□□□ -0.49
Sdc3Q64519 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sdc3Q64519 Gm13492-201ENSMUST00000119772 665 ntBASIC12.02□□□□□ -0.49
Sdc3Q64519 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.02□□□□□ -0.49
Sdc3Q64519 Gm14381-201ENSMUST00000122105 414 ntBASIC12.02□□□□□ -0.49
Sdc3Q64519 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sdc3Q64519 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.02□□□□□ -0.49
Sdc3Q64519 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sdc3Q64519 Gm17376-201ENSMUST00000166016 84 ntBASIC12.02□□□□□ -0.49
Sdc3Q64519 Gm2546-201ENSMUST00000182630 991 ntBASIC12.02□□□□□ -0.49
Sdc3Q64519 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.02□□□□□ -0.49
Sdc3Q64519 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.02□□□□□ -0.49
Sdc3Q64519 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Sdc3Q64519 Gm9257-201ENSMUST00000221254 232 ntBASIC12.02□□□□□ -0.49
Sdc3Q64519 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.02□□□□□ -0.49
Sdc3Q64519 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Sdc3Q64519 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sdc3Q64519 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sdc3Q64519 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sdc3Q64519 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sdc3Q64519 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sdc3Q64519 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sdc3Q64519 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sdc3Q64519 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sdc3Q64519 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sdc3Q64519 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sdc3Q64519 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sdc3Q64519 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sdc3Q64519 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sdc3Q64519 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sdc3Q64519 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sdc3Q64519 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sdc3Q64519 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sdc3Q64519 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sdc3Q64519 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sdc3Q64519 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.01□□□□□ -0.49
Sdc3Q64519 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sdc3Q64519 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sdc3Q64519 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sdc3Q64519 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sdc3Q64519 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Sdc3Q64519 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sdc3Q64519 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms