Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Zfp248Q640N4 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Zfp248Q640N4 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Zfp248Q640N4 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Zfp248Q640N4 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Zfp248Q640N4 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC9.5□□□□□ -0.89
Zfp248Q640N4 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Zfp248Q640N4 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Zfp248Q640N4 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Zfp248Q640N4 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Zfp248Q640N4 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Zfp248Q640N4 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Zfp248Q640N4 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Zfp248Q640N4 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Zfp248Q640N4 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC9.5□□□□□ -0.89
Zfp248Q640N4 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Gm45053-201ENSMUST00000206112 2499 ntBASIC9.49□□□□□ -0.89
Zfp248Q640N4 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Gm18263-201ENSMUST00000220846 1928 ntBASIC9.49□□□□□ -0.89
Zfp248Q640N4 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Gm18227-201ENSMUST00000211082 1468 ntBASIC9.49□□□□□ -0.89
Zfp248Q640N4 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Gm15703-201ENSMUST00000120250 880 ntBASIC9.49□□□□□ -0.89
Zfp248Q640N4 Gm12490-201ENSMUST00000120255 560 ntBASIC9.49□□□□□ -0.89
Zfp248Q640N4 Gm5863-201ENSMUST00000121760 1008 ntBASIC9.49□□□□□ -0.89
Zfp248Q640N4 Gm12363-201ENSMUST00000122250 668 ntBASIC9.49□□□□□ -0.89
Zfp248Q640N4 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC9.49□□□□□ -0.89
Zfp248Q640N4 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Zfp248Q640N4 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Gm25927-201ENSMUST00000175058 117 ntBASIC9.49□□□□□ -0.89
Zfp248Q640N4 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Zfp248Q640N4 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Zfp248Q640N4 H2-Pa-201ENSMUST00000182803 626 ntBASIC9.49□□□□□ -0.89
Zfp248Q640N4 Gm42442-201ENSMUST00000197951 1133 ntBASIC9.49□□□□□ -0.89
Zfp248Q640N4 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Zfp248Q640N4 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Gm24526-201ENSMUST00000082921 158 ntBASIC9.49□□□□□ -0.89
Zfp248Q640N4 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC9.49□□□□□ -0.89
Zfp248Q640N4 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC9.49□□□□□ -0.89
Zfp248Q640N4 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC9.49□□□□□ -0.89
Zfp248Q640N4 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC9.49□□□□□ -0.89
Zfp248Q640N4 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Zfp248Q640N4 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Zfp248Q640N4 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Zfp248Q640N4 Gm37437-201ENSMUST00000194451 1937 ntBASIC9.48□□□□□ -0.89
Zfp248Q640N4 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC9.48□□□□□ -0.89
Zfp248Q640N4 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Zfp248Q640N4 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Zfp248Q640N4 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Zfp248Q640N4 Matn2-203ENSMUST00000226766 3252 ntBASIC9.48□□□□□ -0.89
Zfp248Q640N4 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Zfp248Q640N4 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Zfp248Q640N4 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Zfp248Q640N4 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Zfp248Q640N4 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Zfp248Q640N4 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC9.48□□□□□ -0.89
Zfp248Q640N4 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Zfp248Q640N4 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Zfp248Q640N4 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Zfp248Q640N4 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Zfp248Q640N4 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Zfp248Q640N4 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Zfp248Q640N4 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Zfp248Q640N4 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Zfp248Q640N4 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Zfp248Q640N4 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms