Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm2448-201ENSMUST00000207080 559 ntBASIC11.38□□□□□ -0.59
VcanQ62059 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VcanQ62059 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.38□□□□□ -0.59
VcanQ62059 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VcanQ62059 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
VcanQ62059 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
VcanQ62059 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
VcanQ62059 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.38□□□□□ -0.59
VcanQ62059 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC11.38□□□□□ -0.59
VcanQ62059 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VcanQ62059 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
VcanQ62059 Gm43334-201ENSMUST00000197740 1318 ntBASIC11.38□□□□□ -0.59
VcanQ62059 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VcanQ62059 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VcanQ62059 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
VcanQ62059 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VcanQ62059 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
VcanQ62059 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VcanQ62059 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VcanQ62059 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
VcanQ62059 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VcanQ62059 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC11.37□□□□□ -0.59
VcanQ62059 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
VcanQ62059 Gm4462-201ENSMUST00000166453 492 ntBASIC11.37□□□□□ -0.59
VcanQ62059 Gm9884-201ENSMUST00000194343 1222 ntBASIC11.37□□□□□ -0.59
VcanQ62059 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VcanQ62059 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
VcanQ62059 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC11.37□□□□□ -0.59
VcanQ62059 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC11.37□□□□□ -0.59
VcanQ62059 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
VcanQ62059 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.37□□□□□ -0.59
VcanQ62059 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
VcanQ62059 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
VcanQ62059 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VcanQ62059 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VcanQ62059 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
VcanQ62059 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
VcanQ62059 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VcanQ62059 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
VcanQ62059 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VcanQ62059 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
VcanQ62059 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VcanQ62059 Gm14921-201ENSMUST00000118643 908 ntBASIC11.37□□□□□ -0.59
VcanQ62059 Gm23400-201ENSMUST00000174994 102 ntBASIC11.37□□□□□ -0.59
VcanQ62059 Gm26463-201ENSMUST00000175065 101 ntBASIC11.37□□□□□ -0.59
VcanQ62059 Gm24332-201ENSMUST00000175102 102 ntBASIC11.37□□□□□ -0.59
VcanQ62059 Gm25959-201ENSMUST00000175112 102 ntBASIC11.37□□□□□ -0.59
VcanQ62059 Gm22475-201ENSMUST00000175169 102 ntBASIC11.37□□□□□ -0.59
VcanQ62059 Gm22903-201ENSMUST00000175193 102 ntBASIC11.37□□□□□ -0.59
VcanQ62059 Gm25070-201ENSMUST00000175237 102 ntBASIC11.37□□□□□ -0.59
VcanQ62059 Gm24159-201ENSMUST00000175264 102 ntBASIC11.37□□□□□ -0.59
VcanQ62059 Gm25299-201ENSMUST00000175283 102 ntBASIC11.37□□□□□ -0.59
VcanQ62059 Gm23798-201ENSMUST00000175560 102 ntBASIC11.37□□□□□ -0.59
VcanQ62059 Gm23802-201ENSMUST00000175565 102 ntBASIC11.37□□□□□ -0.59
VcanQ62059 Gm25708-201ENSMUST00000177687 102 ntBASIC11.37□□□□□ -0.59
VcanQ62059 Gm24370-201ENSMUST00000178007 102 ntBASIC11.37□□□□□ -0.59
VcanQ62059 Gm23049-201ENSMUST00000178068 102 ntBASIC11.37□□□□□ -0.59
VcanQ62059 Gm28019-201ENSMUST00000178138 101 ntBASIC11.37□□□□□ -0.59
VcanQ62059 Gm25571-201ENSMUST00000178322 102 ntBASIC11.37□□□□□ -0.59
VcanQ62059 Gm25355-201ENSMUST00000178456 101 ntBASIC11.37□□□□□ -0.59
VcanQ62059 Gm24975-201ENSMUST00000178492 101 ntBASIC11.37□□□□□ -0.59
VcanQ62059 Gm23189-201ENSMUST00000178954 102 ntBASIC11.37□□□□□ -0.59
VcanQ62059 Gm25100-201ENSMUST00000179750 101 ntBASIC11.37□□□□□ -0.59
VcanQ62059 Gm23064-201ENSMUST00000179866 101 ntBASIC11.37□□□□□ -0.59
VcanQ62059 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
VcanQ62059 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
VcanQ62059 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
VcanQ62059 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
VcanQ62059 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VcanQ62059 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VcanQ62059 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VcanQ62059 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
VcanQ62059 Gm11663-201ENSMUST00000117888 290 ntBASIC11.37□□□□□ -0.59
VcanQ62059 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
VcanQ62059 Gm13204-201ENSMUST00000120110 821 ntBASIC11.37□□□□□ -0.59
VcanQ62059 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VcanQ62059 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.37□□□□□ -0.59
VcanQ62059 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
VcanQ62059 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC11.37□□□□□ -0.59
VcanQ62059 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.37□□□□□ -0.59
VcanQ62059 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC11.37□□□□□ -0.59
VcanQ62059 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.37□□□□□ -0.59
VcanQ62059 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VcanQ62059 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
VcanQ62059 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VcanQ62059 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
VcanQ62059 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
VcanQ62059 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
VcanQ62059 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VcanQ62059 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.36□□□□□ -0.59
VcanQ62059 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.36□□□□□ -0.59
VcanQ62059 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VcanQ62059 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VcanQ62059 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
VcanQ62059 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
VcanQ62059 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
VcanQ62059 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VcanQ62059 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.36□□□□□ -0.59
VcanQ62059 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC11.36□□□□□ -0.59
VcanQ62059 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms