Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Ctr9Q62018 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ctr9Q62018 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ctr9Q62018 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ctr9Q62018 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Ctr9Q62018 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ctr9Q62018 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Ctr9Q62018 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.73□□□□□ -0.05
Ctr9Q62018 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.73□□□□□ -0.05
Ctr9Q62018 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ctr9Q62018 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ctr9Q62018 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ctr9Q62018 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ctr9Q62018 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ctr9Q62018 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ctr9Q62018 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ctr9Q62018 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ctr9Q62018 Gm14109-201ENSMUST00000118814 309 ntBASIC14.73□□□□□ -0.05
Ctr9Q62018 Gm14760-201ENSMUST00000121831 999 ntBASIC14.73□□□□□ -0.05
Ctr9Q62018 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ctr9Q62018 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC14.73□□□□□ -0.05
Ctr9Q62018 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ctr9Q62018 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ctr9Q62018 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ctr9Q62018 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ctr9Q62018 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ctr9Q62018 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ctr9Q62018 Gm27046-201ENSMUST00000182160 463 ntBASIC14.73□□□□□ -0.05
Ctr9Q62018 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ctr9Q62018 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ctr9Q62018 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ctr9Q62018 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ctr9Q62018 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ctr9Q62018 Gm10782-202ENSMUST00000223775 1480 ntBASIC14.73□□□□□ -0.05
Ctr9Q62018 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ctr9Q62018 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ctr9Q62018 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ctr9Q62018 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ctr9Q62018 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ctr9Q62018 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ctr9Q62018 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ctr9Q62018 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Ctr9Q62018 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ctr9Q62018 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Ctr9Q62018 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC14.73□□□□□ -0.05
Ctr9Q62018 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Ctr9Q62018 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ctr9Q62018 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ctr9Q62018 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ctr9Q62018 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ctr9Q62018 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ctr9Q62018 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC14.72□□□□□ -0.05
Ctr9Q62018 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ctr9Q62018 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ctr9Q62018 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ctr9Q62018 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ctr9Q62018 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ctr9Q62018 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ctr9Q62018 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ctr9Q62018 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Ctr9Q62018 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ctr9Q62018 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.72□□□□□ -0.05
Ctr9Q62018 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ctr9Q62018 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ctr9Q62018 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ctr9Q62018 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Ctr9Q62018 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC14.72□□□□□ -0.05
Ctr9Q62018 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ctr9Q62018 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ctr9Q62018 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Ctr9Q62018 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Ctr9Q62018 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ctr9Q62018 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ctr9Q62018 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ctr9Q62018 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ctr9Q62018 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ctr9Q62018 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ctr9Q62018 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ctr9Q62018 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ctr9Q62018 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ctr9Q62018 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ctr9Q62018 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ctr9Q62018 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ctr9Q62018 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ctr9Q62018 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ctr9Q62018 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.71□□□□□ -0.05
Ctr9Q62018 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.71□□□□□ -0.05
Ctr9Q62018 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.71□□□□□ -0.05
Ctr9Q62018 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Ctr9Q62018 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ctr9Q62018 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ctr9Q62018 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ctr9Q62018 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ctr9Q62018 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ctr9Q62018 Gm4819-201ENSMUST00000182170 1009 ntBASIC14.71□□□□□ -0.05
Ctr9Q62018 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ctr9Q62018 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.71□□□□□ -0.05
Ctr9Q62018 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Ctr9Q62018 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ctr9Q62018 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms