Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rai1Q61818 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rai1Q61818 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Rai1Q61818 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rai1Q61818 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rai1Q61818 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rai1Q61818 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Rai1Q61818 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rai1Q61818 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC11.89□□□□□ -0.51
Rai1Q61818 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.89□□□□□ -0.51
Rai1Q61818 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.89□□□□□ -0.51
Rai1Q61818 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rai1Q61818 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rai1Q61818 Gm45575-201ENSMUST00000210283 548 ntBASIC11.89□□□□□ -0.51
Rai1Q61818 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC11.89□□□□□ -0.51
Rai1Q61818 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.89□□□□□ -0.51
Rai1Q61818 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Rai1Q61818 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rai1Q61818 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Rai1Q61818 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rai1Q61818 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rai1Q61818 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.89□□□□□ -0.51
Rai1Q61818 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rai1Q61818 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rai1Q61818 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.89□□□□□ -0.51
Rai1Q61818 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rai1Q61818 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rai1Q61818 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rai1Q61818 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Rai1Q61818 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Rai1Q61818 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.88□□□□□ -0.51
Rai1Q61818 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rai1Q61818 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rai1Q61818 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rai1Q61818 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rai1Q61818 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.88□□□□□ -0.51
Rai1Q61818 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Rai1Q61818 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.88□□□□□ -0.51
Rai1Q61818 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.88□□□□□ -0.51
Rai1Q61818 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rai1Q61818 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.88□□□□□ -0.51
Rai1Q61818 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rai1Q61818 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Rai1Q61818 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rai1Q61818 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC11.88□□□□□ -0.51
Rai1Q61818 Gm3150-201ENSMUST00000166418 204 ntBASIC11.88□□□□□ -0.51
Rai1Q61818 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC11.88□□□□□ -0.51
Rai1Q61818 Gm23045-201ENSMUST00000175041 96 ntBASIC11.88□□□□□ -0.51
Rai1Q61818 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rai1Q61818 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Rai1Q61818 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.88□□□□□ -0.51
Rai1Q61818 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rai1Q61818 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC11.88□□□□□ -0.51
Rai1Q61818 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.88□□□□□ -0.51
Rai1Q61818 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rai1Q61818 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rai1Q61818 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rai1Q61818 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rai1Q61818 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rai1Q61818 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rai1Q61818 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rai1Q61818 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Rai1Q61818 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rai1Q61818 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rai1Q61818 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rai1Q61818 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rai1Q61818 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rai1Q61818 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rai1Q61818 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rai1Q61818 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rai1Q61818 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.87□□□□□ -0.51
Rai1Q61818 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rai1Q61818 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rai1Q61818 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rai1Q61818 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Rai1Q61818 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rai1Q61818 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.87□□□□□ -0.51
Rai1Q61818 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rai1Q61818 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rai1Q61818 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rai1Q61818 Gm14247-201ENSMUST00000120950 237 ntBASIC11.87□□□□□ -0.51
Rai1Q61818 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.87□□□□□ -0.51
Rai1Q61818 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rai1Q61818 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rai1Q61818 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.87□□□□□ -0.51
Rai1Q61818 Mir8115-201ENSMUST00000184992 119 ntBASIC11.87□□□□□ -0.51
Rai1Q61818 AC099645.1-201ENSMUST00000226476 1105 ntBASIC11.87□□□□□ -0.51
Rai1Q61818 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rai1Q61818 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rai1Q61818 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rai1Q61818 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rai1Q61818 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Rai1Q61818 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rai1Q61818 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Rai1Q61818 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rai1Q61818 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rai1Q61818 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rai1Q61818 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.87□□□□□ -0.51
Rai1Q61818 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rai1Q61818 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms