Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Gli3Q61602 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gli3Q61602 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gli3Q61602 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC16.35■□□□□ 0.21
Gli3Q61602 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.35■□□□□ 0.21
Gli3Q61602 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gli3Q61602 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Gli3Q61602 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gli3Q61602 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gli3Q61602 Gm12684-201ENSMUST00000118675 999 ntBASIC16.34■□□□□ 0.21
Gli3Q61602 Gm15815-201ENSMUST00000120569 255 ntBASIC16.34■□□□□ 0.21
Gli3Q61602 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC16.34■□□□□ 0.21
Gli3Q61602 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Gli3Q61602 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC16.34■□□□□ 0.21
Gli3Q61602 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gli3Q61602 Gm43249-201ENSMUST00000200464 458 ntBASIC16.34■□□□□ 0.21
Gli3Q61602 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Gli3Q61602 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Gli3Q61602 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gli3Q61602 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gli3Q61602 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gli3Q61602 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gli3Q61602 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Gli3Q61602 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Gli3Q61602 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Gli3Q61602 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Gli3Q61602 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gli3Q61602 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gli3Q61602 Gm14005-210ENSMUST00000225087 1413 ntBASIC16.34■□□□□ 0.21
Gli3Q61602 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Gli3Q61602 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Gli3Q61602 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gli3Q61602 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Gli3Q61602 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Gli3Q61602 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Gli3Q61602 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC16.34■□□□□ 0.21
Gli3Q61602 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Gli3Q61602 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gli3Q61602 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gli3Q61602 AC154305.2-201ENSMUST00000225813 901 ntBASIC16.34■□□□□ 0.21
Gli3Q61602 AC156790.2-201ENSMUST00000227115 568 ntBASIC16.34■□□□□ 0.21
Gli3Q61602 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Gli3Q61602 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Gli3Q61602 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gli3Q61602 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
Gli3Q61602 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Gli3Q61602 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Gli3Q61602 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Gli3Q61602 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Gli3Q61602 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gli3Q61602 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gli3Q61602 Gm5939-201ENSMUST00000119613 2874 ntBASIC16.33■□□□□ 0.2
Gli3Q61602 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gli3Q61602 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Gli3Q61602 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gli3Q61602 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gli3Q61602 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Gli3Q61602 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.33■□□□□ 0.2
Gli3Q61602 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC16.33■□□□□ 0.2
Gli3Q61602 Gm13827-201ENSMUST00000148801 372 ntBASIC16.33■□□□□ 0.2
Gli3Q61602 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gli3Q61602 Gm7940-201ENSMUST00000218195 769 ntBASIC16.33■□□□□ 0.2
Gli3Q61602 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gli3Q61602 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
Gli3Q61602 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gli3Q61602 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gli3Q61602 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gli3Q61602 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gli3Q61602 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gli3Q61602 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gli3Q61602 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gli3Q61602 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gli3Q61602 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gli3Q61602 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gli3Q61602 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gli3Q61602 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gli3Q61602 AC129931.1-201ENSMUST00000228865 1861 ntBASIC16.32■□□□□ 0.2
Gli3Q61602 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC16.32■□□□□ 0.2
Gli3Q61602 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC16.32■□□□□ 0.2
Gli3Q61602 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gli3Q61602 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC16.32■□□□□ 0.2
Gli3Q61602 Gm10807-201ENSMUST00000177134 795 ntBASIC16.32■□□□□ 0.2
Gli3Q61602 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gli3Q61602 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Gli3Q61602 AC118639.2-201ENSMUST00000226289 223 ntBASIC16.32■□□□□ 0.2
Gli3Q61602 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Gli3Q61602 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gli3Q61602 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gli3Q61602 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gli3Q61602 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.32■□□□□ 0.2
Gli3Q61602 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gli3Q61602 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Gli3Q61602 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gli3Q61602 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Gli3Q61602 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gli3Q61602 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gli3Q61602 Deup1-201ENSMUST00000045513 2583 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Gli3Q61602 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Gli3Q61602 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gli3Q61602 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms