Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Smarcd1Q61466 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd1Q61466 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd1Q61466 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd1Q61466 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Smarcd1Q61466 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Smarcd1Q61466 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd1Q61466 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd1Q61466 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd1Q61466 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd1Q61466 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd1Q61466 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcd1Q61466 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.97□□□□□ -0.33
Smarcd1Q61466 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd1Q61466 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.97□□□□□ -0.33
Smarcd1Q61466 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Gm44651-201ENSMUST00000207343 372 ntBASIC12.97□□□□□ -0.33
Smarcd1Q61466 Gzmn-202ENSMUST00000225535 989 ntBASIC12.97□□□□□ -0.33
Smarcd1Q61466 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.97□□□□□ -0.33
Smarcd1Q61466 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.97□□□□□ -0.33
Smarcd1Q61466 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Gm9996-201ENSMUST00000070359 913 ntBASIC12.97□□□□□ -0.33
Smarcd1Q61466 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Smarcd1Q61466 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Smarcd1Q61466 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Smarcd1Q61466 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Smarcd1Q61466 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcd1Q61466 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcd1Q61466 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcd1Q61466 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Smarcd1Q61466 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcd1Q61466 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcd1Q61466 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcd1Q61466 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcd1Q61466 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcd1Q61466 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcd1Q61466 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcd1Q61466 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcd1Q61466 Gm6963-201ENSMUST00000147879 379 ntBASIC12.96□□□□□ -0.33
Smarcd1Q61466 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcd1Q61466 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Smarcd1Q61466 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.96□□□□□ -0.33
Smarcd1Q61466 Rprl1-202ENSMUST00000198476 238 ntBASIC12.96□□□□□ -0.33
Smarcd1Q61466 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.96□□□□□ -0.33
Smarcd1Q61466 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.96□□□□□ -0.33
Smarcd1Q61466 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcd1Q61466 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.96□□□□□ -0.33
Smarcd1Q61466 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.96□□□□□ -0.33
Smarcd1Q61466 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.96□□□□□ -0.33
Smarcd1Q61466 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcd1Q61466 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.96□□□□□ -0.33
Smarcd1Q61466 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Smarcd1Q61466 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcd1Q61466 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.96□□□□□ -0.34
Smarcd1Q61466 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smarcd1Q61466 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smarcd1Q61466 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.34
Smarcd1Q61466 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smarcd1Q61466 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Smarcd1Q61466 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smarcd1Q61466 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcd1Q61466 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms