Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a1Q61245 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC13.66□□□□□ -0.22
Col11a1Q61245 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.66□□□□□ -0.22
Col11a1Q61245 Gm43778-201ENSMUST00000199438 199 ntBASIC13.66□□□□□ -0.22
Col11a1Q61245 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC13.66□□□□□ -0.22
Col11a1Q61245 Gm18514-201ENSMUST00000218980 436 ntBASIC13.66□□□□□ -0.22
Col11a1Q61245 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.66□□□□□ -0.22
Col11a1Q61245 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a1Q61245 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a1Q61245 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Col11a1Q61245 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.66□□□□□ -0.22
Col11a1Q61245 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a1Q61245 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a1Q61245 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a1Q61245 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col11a1Q61245 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.65□□□□□ -0.22
Col11a1Q61245 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col11a1Q61245 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col11a1Q61245 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col11a1Q61245 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col11a1Q61245 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col11a1Q61245 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col11a1Q61245 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col11a1Q61245 Gm12948-201ENSMUST00000119406 682 ntBASIC13.65□□□□□ -0.22
Col11a1Q61245 Gm12943-201ENSMUST00000119616 210 ntBASIC13.65□□□□□ -0.22
Col11a1Q61245 Gm14213-201ENSMUST00000119778 768 ntBASIC13.65□□□□□ -0.22
Col11a1Q61245 Gm11244-201ENSMUST00000121243 237 ntBASIC13.65□□□□□ -0.22
Col11a1Q61245 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col11a1Q61245 Gm17192-201ENSMUST00000169031 511 ntBASIC13.65□□□□□ -0.22
Col11a1Q61245 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Col11a1Q61245 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Col11a1Q61245 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC13.65□□□□□ -0.22
Col11a1Q61245 Gm44647-201ENSMUST00000207402 428 ntBASIC13.65□□□□□ -0.22
Col11a1Q61245 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col11a1Q61245 CT573086.4-201ENSMUST00000226729 342 ntBASIC13.65□□□□□ -0.22
Col11a1Q61245 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col11a1Q61245 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.65□□□□□ -0.22
Col11a1Q61245 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.65□□□□□ -0.22
Col11a1Q61245 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col11a1Q61245 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Col11a1Q61245 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.65□□□□□ -0.22
Col11a1Q61245 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col11a1Q61245 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col11a1Q61245 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col11a1Q61245 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col11a1Q61245 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col11a1Q61245 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Col11a1Q61245 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Col11a1Q61245 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col11a1Q61245 Gm13019-201ENSMUST00000120000 276 ntBASIC13.64□□□□□ -0.23
Col11a1Q61245 Gm10169-201ENSMUST00000121822 348 ntBASIC13.64□□□□□ -0.23
Col11a1Q61245 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col11a1Q61245 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Col11a1Q61245 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.64□□□□□ -0.23
Col11a1Q61245 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC13.64□□□□□ -0.23
Col11a1Q61245 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC13.64□□□□□ -0.23
Col11a1Q61245 Gm45500-201ENSMUST00000211676 803 ntBASIC13.64□□□□□ -0.23
Col11a1Q61245 Gm45856-201ENSMUST00000212752 416 ntBASIC13.64□□□□□ -0.23
Col11a1Q61245 Gm5805-201ENSMUST00000072779 456 ntBASIC13.64□□□□□ -0.23
Col11a1Q61245 Gm23105-201ENSMUST00000083719 134 ntBASIC13.64□□□□□ -0.23
Col11a1Q61245 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Col11a1Q61245 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col11a1Q61245 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col11a1Q61245 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col11a1Q61245 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col11a1Q61245 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.64□□□□□ -0.23
Col11a1Q61245 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Col11a1Q61245 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col11a1Q61245 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.64□□□□□ -0.23
Col11a1Q61245 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.64□□□□□ -0.23
Col11a1Q61245 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col11a1Q61245 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col11a1Q61245 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col11a1Q61245 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col11a1Q61245 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col11a1Q61245 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Col11a1Q61245 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col11a1Q61245 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC13.64□□□□□ -0.23
Col11a1Q61245 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC13.64□□□□□ -0.23
Col11a1Q61245 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC13.64□□□□□ -0.23
Col11a1Q61245 Gm20414-201ENSMUST00000172918 646 ntBASIC13.64□□□□□ -0.23
Col11a1Q61245 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Col11a1Q61245 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Col11a1Q61245 Gm45592-201ENSMUST00000209605 1043 ntBASIC13.64□□□□□ -0.23
Col11a1Q61245 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col11a1Q61245 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Col11a1Q61245 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col11a1Q61245 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.64□□□□□ -0.23
Col11a1Q61245 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col11a1Q61245 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col11a1Q61245 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col11a1Q61245 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col11a1Q61245 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col11a1Q61245 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Col11a1Q61245 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col11a1Q61245 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.63□□□□□ -0.23
Col11a1Q61245 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Col11a1Q61245 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col11a1Q61245 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col11a1Q61245 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms