Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nr1h4Q60641 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nr1h4Q60641 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.9□□□□□ -0.5
Nr1h4Q60641 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nr1h4Q60641 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nr1h4Q60641 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nr1h4Q60641 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Nr1h4Q60641 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nr1h4Q60641 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nr1h4Q60641 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nr1h4Q60641 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Nr1h4Q60641 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nr1h4Q60641 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nr1h4Q60641 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nr1h4Q60641 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.9□□□□□ -0.51
Nr1h4Q60641 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nr1h4Q60641 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.89□□□□□ -0.51
Nr1h4Q60641 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nr1h4Q60641 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.89□□□□□ -0.51
Nr1h4Q60641 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Gm11637-201ENSMUST00000120601 592 ntBASIC11.89□□□□□ -0.51
Nr1h4Q60641 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC11.89□□□□□ -0.51
Nr1h4Q60641 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nr1h4Q60641 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Gm15823-201ENSMUST00000064305 670 ntBASIC11.89□□□□□ -0.51
Nr1h4Q60641 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.89□□□□□ -0.51
Nr1h4Q60641 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nr1h4Q60641 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nr1h4Q60641 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nr1h4Q60641 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nr1h4Q60641 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Nr1h4Q60641 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.88□□□□□ -0.51
Nr1h4Q60641 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nr1h4Q60641 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nr1h4Q60641 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Nr1h4Q60641 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Nr1h4Q60641 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Nr1h4Q60641 Gm12384-201ENSMUST00000119228 919 ntBASIC11.88□□□□□ -0.51
Nr1h4Q60641 Gm15703-201ENSMUST00000120250 880 ntBASIC11.88□□□□□ -0.51
Nr1h4Q60641 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nr1h4Q60641 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nr1h4Q60641 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Nr1h4Q60641 Gm22121-201ENSMUST00000175148 54 ntBASIC11.88□□□□□ -0.51
Nr1h4Q60641 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.88□□□□□ -0.51
Nr1h4Q60641 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.88□□□□□ -0.51
Nr1h4Q60641 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.88□□□□□ -0.51
Nr1h4Q60641 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nr1h4Q60641 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nr1h4Q60641 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Nr1h4Q60641 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nr1h4Q60641 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.88□□□□□ -0.51
Nr1h4Q60641 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nr1h4Q60641 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nr1h4Q60641 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nr1h4Q60641 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Nr1h4Q60641 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nr1h4Q60641 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nr1h4Q60641 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.88□□□□□ -0.51
Nr1h4Q60641 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nr1h4Q60641 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nr1h4Q60641 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms