Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Gm44958-201ENSMUST00000203734 736 ntBASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Gzmn-202ENSMUST00000225535 989 ntBASIC14.94□□□□□ -0.02
Vps54Q5SPW0 AC161537.1-201ENSMUST00000226199 1015 ntBASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Gm10312-201ENSMUST00000078515 489 ntBASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Vps54Q5SPW0 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Vps54Q5SPW0 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.93□□□□□ -0.02
Vps54Q5SPW0 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Mir877-201ENSMUST00000104738 85 ntBASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Gm4760-201ENSMUST00000119663 1030 ntBASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Gm45224-201ENSMUST00000208203 414 ntBASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Gm10782-202ENSMUST00000223775 1480 ntBASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps54Q5SPW0 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps54Q5SPW0 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Gm24934-201ENSMUST00000103764 111 ntBASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC14.92□□□□□ -0.02
Vps54Q5SPW0 Gm13097-201ENSMUST00000210722 397 ntBASIC14.92□□□□□ -0.02
Vps54Q5SPW0 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms