Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc85aQ5SP85 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc85aQ5SP85 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.8□□□□□ -0.2
Ccdc85aQ5SP85 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc85aQ5SP85 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc85aQ5SP85 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc85aQ5SP85 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.8□□□□□ -0.2
Ccdc85aQ5SP85 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc85aQ5SP85 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc85aQ5SP85 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Gm15573-201ENSMUST00000119487 540 ntBASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Gm11675-201ENSMUST00000121873 832 ntBASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Gm5733-201ENSMUST00000190232 939 ntBASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc85aQ5SP85 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Gm23596-201ENSMUST00000104304 132 ntBASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Gm29155-201ENSMUST00000185910 269 ntBASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Gm38210-201ENSMUST00000191944 809 ntBASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Ighv4-2-201ENSMUST00000192975 362 ntBASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Gm6905-201ENSMUST00000205729 511 ntBASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Gm4607-201ENSMUST00000206649 577 ntBASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Gm270-201ENSMUST00000223010 976 ntBASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Mir219a-1-201ENSMUST00000083621 110 ntBASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc85aQ5SP85 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc85aQ5SP85 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc85aQ5SP85 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc85aQ5SP85 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc85aQ5SP85 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc85aQ5SP85 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc85aQ5SP85 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms