Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Urb1Q571H0 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Urb1Q571H0 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Urb1Q571H0 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Urb1Q571H0 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Urb1Q571H0 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Urb1Q571H0 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.49□□□□□ -0.57
Urb1Q571H0 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.49□□□□□ -0.57
Urb1Q571H0 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.49□□□□□ -0.57
Urb1Q571H0 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC11.49□□□□□ -0.57
Urb1Q571H0 Rmrp-201ENSMUST00000157463 271 ntBASIC11.49□□□□□ -0.57
Urb1Q571H0 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Urb1Q571H0 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Urb1Q571H0 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Urb1Q571H0 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.49□□□□□ -0.57
Urb1Q571H0 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.49□□□□□ -0.57
Urb1Q571H0 Gm45925-201ENSMUST00000218882 744 ntBASIC11.49□□□□□ -0.57
Urb1Q571H0 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.49□□□□□ -0.57
Urb1Q571H0 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Urb1Q571H0 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Urb1Q571H0 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Urb1Q571H0 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.49□□□□□ -0.57
Urb1Q571H0 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Urb1Q571H0 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Urb1Q571H0 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Urb1Q571H0 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Urb1Q571H0 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Urb1Q571H0 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Urb1Q571H0 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.49□□□□□ -0.57
Urb1Q571H0 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Urb1Q571H0 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Urb1Q571H0 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.49□□□□□ -0.57
Urb1Q571H0 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Urb1Q571H0 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Urb1Q571H0 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Urb1Q571H0 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Urb1Q571H0 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Urb1Q571H0 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Urb1Q571H0 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Urb1Q571H0 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Urb1Q571H0 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Urb1Q571H0 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.48□□□□□ -0.57
Urb1Q571H0 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Urb1Q571H0 Gm13888-201ENSMUST00000119148 422 ntBASIC11.48□□□□□ -0.57
Urb1Q571H0 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Urb1Q571H0 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Urb1Q571H0 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.48□□□□□ -0.57
Urb1Q571H0 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Urb1Q571H0 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Urb1Q571H0 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Urb1Q571H0 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Urb1Q571H0 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Urb1Q571H0 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Urb1Q571H0 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Urb1Q571H0 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Urb1Q571H0 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Urb1Q571H0 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Urb1Q571H0 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Urb1Q571H0 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Urb1Q571H0 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Urb1Q571H0 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Urb1Q571H0 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Urb1Q571H0 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Urb1Q571H0 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Urb1Q571H0 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Urb1Q571H0 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Urb1Q571H0 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Urb1Q571H0 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.48□□□□□ -0.57
Urb1Q571H0 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Urb1Q571H0 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.48□□□□□ -0.57
Urb1Q571H0 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Urb1Q571H0 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Urb1Q571H0 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Urb1Q571H0 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Urb1Q571H0 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Urb1Q571H0 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.48□□□□□ -0.57
Urb1Q571H0 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Urb1Q571H0 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Urb1Q571H0 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Urb1Q571H0 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Urb1Q571H0 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Urb1Q571H0 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Urb1Q571H0 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Urb1Q571H0 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Urb1Q571H0 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.47□□□□□ -0.57
Urb1Q571H0 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Urb1Q571H0 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.47□□□□□ -0.57
Urb1Q571H0 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms