Protein–RNA interactions for Protein: Q3UQ97

Gm5460, Predicted gene 5460, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5460Q3UQ97 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 Gm23270-201ENSMUST00000104055 131 ntBASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 Gm26956-201ENSMUST00000182176 986 ntBASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 Gm27023-201ENSMUST00000182372 285 ntBASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 Gm18304-201ENSMUST00000189162 546 ntBASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 Gm3961-201ENSMUST00000204425 994 ntBASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 Gm7783-201ENSMUST00000204795 781 ntBASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm5460Q3UQ97 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Gm12314-201ENSMUST00000118104 538 ntBASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Gm13570-201ENSMUST00000140763 309 ntBASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Gm42937-201ENSMUST00000197360 752 ntBASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm5460Q3UQ97 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.04□□□□□ -0.48
Gm5460Q3UQ97 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm5460Q3UQ97 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.04□□□□□ -0.48
Gm5460Q3UQ97 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm5460Q3UQ97 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Gm5460Q3UQ97 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Gm5460Q3UQ97 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Gm5460Q3UQ97 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm5460Q3UQ97 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.04□□□□□ -0.48
Gm5460Q3UQ97 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm5460Q3UQ97 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm5460Q3UQ97 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Gm5460Q3UQ97 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Gm5460Q3UQ97 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.04□□□□□ -0.48
Gm5460Q3UQ97 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.04□□□□□ -0.48
Gm5460Q3UQ97 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.04□□□□□ -0.48
Gm5460Q3UQ97 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm5460Q3UQ97 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.04□□□□□ -0.48
Gm5460Q3UQ97 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Gm5460Q3UQ97 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms