Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf1Q07802 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf1Q07802 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf1Q07802 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf1Q07802 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf1Q07802 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf1Q07802 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf1Q07802 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf1Q07802 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf1Q07802 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf1Q07802 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf1Q07802 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf1Q07802 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf1Q07802 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf1Q07802 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf1Q07802 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf1Q07802 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf1Q07802 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf1Q07802 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf1Q07802 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf1Q07802 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf1Q07802 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.66□□□□□ -0.38
Ebf1Q07802 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf1Q07802 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf1Q07802 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf1Q07802 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ebf1Q07802 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf1Q07802 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Ebf1Q07802 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.66□□□□□ -0.38
Ebf1Q07802 Gm14921-201ENSMUST00000118643 908 ntBASIC12.66□□□□□ -0.38
Ebf1Q07802 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.66□□□□□ -0.38
Ebf1Q07802 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf1Q07802 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.66□□□□□ -0.38
Ebf1Q07802 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.66□□□□□ -0.38
Ebf1Q07802 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.66□□□□□ -0.38
Ebf1Q07802 Gm19931-201ENSMUST00000198920 368 ntBASIC12.66□□□□□ -0.38
Ebf1Q07802 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.66□□□□□ -0.38
Ebf1Q07802 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.66□□□□□ -0.38
Ebf1Q07802 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.66□□□□□ -0.38
Ebf1Q07802 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf1Q07802 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ebf1Q07802 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf1Q07802 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf1Q07802 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.66□□□□□ -0.38
Ebf1Q07802 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.66□□□□□ -0.38
Ebf1Q07802 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf1Q07802 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf1Q07802 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf1Q07802 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf1Q07802 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf1Q07802 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf1Q07802 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf1Q07802 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf1Q07802 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf1Q07802 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ebf1Q07802 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.65□□□□□ -0.38
Ebf1Q07802 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.65□□□□□ -0.38
Ebf1Q07802 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf1Q07802 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Ebf1Q07802 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf1Q07802 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.65□□□□□ -0.38
Ebf1Q07802 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf1Q07802 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf1Q07802 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf1Q07802 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf1Q07802 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.65□□□□□ -0.38
Ebf1Q07802 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ebf1Q07802 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf1Q07802 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf1Q07802 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf1Q07802 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.65□□□□□ -0.38
Ebf1Q07802 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.65□□□□□ -0.38
Ebf1Q07802 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Ebf1Q07802 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf1Q07802 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf1Q07802 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.65□□□□□ -0.38
Ebf1Q07802 Gm23200-201ENSMUST00000104379 132 ntBASIC12.65□□□□□ -0.38
Ebf1Q07802 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.65□□□□□ -0.38
Ebf1Q07802 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ebf1Q07802 Gm12291-201ENSMUST00000121627 311 ntBASIC12.65□□□□□ -0.38
Ebf1Q07802 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.65□□□□□ -0.38
Ebf1Q07802 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf1Q07802 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf1Q07802 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC12.65□□□□□ -0.38
Ebf1Q07802 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.65□□□□□ -0.38
Ebf1Q07802 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf1Q07802 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf1Q07802 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf1Q07802 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.65□□□□□ -0.38
Ebf1Q07802 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.65□□□□□ -0.38
Ebf1Q07802 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.65□□□□□ -0.38
Ebf1Q07802 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf1Q07802 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.65□□□□□ -0.38
Ebf1Q07802 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Ebf1Q07802 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf1Q07802 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
Ebf1Q07802 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf1Q07802 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf1Q07802 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf1Q07802 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms