Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Scn1bP97952 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Scn1bP97952 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.4□□□□□ -0.58
Scn1bP97952 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scn1bP97952 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scn1bP97952 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scn1bP97952 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scn1bP97952 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scn1bP97952 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Scn1bP97952 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scn1bP97952 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scn1bP97952 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scn1bP97952 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Scn1bP97952 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scn1bP97952 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Scn1bP97952 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Scn1bP97952 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scn1bP97952 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scn1bP97952 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scn1bP97952 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Scn1bP97952 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Scn1bP97952 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Scn1bP97952 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Scn1bP97952 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scn1bP97952 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Scn1bP97952 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scn1bP97952 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scn1bP97952 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scn1bP97952 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Scn1bP97952 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scn1bP97952 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scn1bP97952 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Scn1bP97952 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scn1bP97952 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scn1bP97952 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scn1bP97952 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.39□□□□□ -0.59
Scn1bP97952 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scn1bP97952 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scn1bP97952 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.39□□□□□ -0.59
Scn1bP97952 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Scn1bP97952 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.39□□□□□ -0.59
Scn1bP97952 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Scn1bP97952 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.39□□□□□ -0.59
Scn1bP97952 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Scn1bP97952 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Scn1bP97952 Gm9522-201ENSMUST00000182394 926 ntBASIC11.39□□□□□ -0.59
Scn1bP97952 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.39□□□□□ -0.59
Scn1bP97952 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Scn1bP97952 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scn1bP97952 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC11.39□□□□□ -0.59
Scn1bP97952 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scn1bP97952 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.39□□□□□ -0.59
Scn1bP97952 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scn1bP97952 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.39□□□□□ -0.59
Scn1bP97952 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Scn1bP97952 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scn1bP97952 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scn1bP97952 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Scn1bP97952 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Scn1bP97952 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scn1bP97952 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scn1bP97952 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scn1bP97952 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.39□□□□□ -0.59
Scn1bP97952 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.39□□□□□ -0.59
Scn1bP97952 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scn1bP97952 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.39□□□□□ -0.59
Scn1bP97952 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scn1bP97952 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scn1bP97952 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scn1bP97952 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Scn1bP97952 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scn1bP97952 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.39□□□□□ -0.59
Scn1bP97952 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.39□□□□□ -0.59
Scn1bP97952 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Scn1bP97952 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.39□□□□□ -0.59
Scn1bP97952 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scn1bP97952 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
Scn1bP97952 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scn1bP97952 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
Scn1bP97952 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scn1bP97952 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scn1bP97952 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Scn1bP97952 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scn1bP97952 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scn1bP97952 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scn1bP97952 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scn1bP97952 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.38□□□□□ -0.59
Scn1bP97952 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scn1bP97952 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scn1bP97952 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.38□□□□□ -0.59
Scn1bP97952 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.38□□□□□ -0.59
Scn1bP97952 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.38□□□□□ -0.59
Scn1bP97952 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.38□□□□□ -0.59
Scn1bP97952 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.38□□□□□ -0.59
Scn1bP97952 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Scn1bP97952 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Scn1bP97952 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scn1bP97952 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Scn1bP97952 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scn1bP97952 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms