Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SgcbP82349 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.15□□□□□ -0.62
SgcbP82349 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
SgcbP82349 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.15□□□□□ -0.62
SgcbP82349 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SgcbP82349 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
SgcbP82349 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SgcbP82349 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.15□□□□□ -0.62
SgcbP82349 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.15□□□□□ -0.62
SgcbP82349 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SgcbP82349 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.15□□□□□ -0.62
SgcbP82349 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SgcbP82349 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
SgcbP82349 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
SgcbP82349 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SgcbP82349 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
SgcbP82349 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
SgcbP82349 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
SgcbP82349 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SgcbP82349 Gm12058-201ENSMUST00000118614 437 ntBASIC11.15□□□□□ -0.62
SgcbP82349 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SgcbP82349 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SgcbP82349 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.15□□□□□ -0.62
SgcbP82349 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.15□□□□□ -0.62
SgcbP82349 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.15□□□□□ -0.62
SgcbP82349 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.15□□□□□ -0.62
SgcbP82349 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
SgcbP82349 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.15□□□□□ -0.62
SgcbP82349 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
SgcbP82349 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.15□□□□□ -0.62
SgcbP82349 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SgcbP82349 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SgcbP82349 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SgcbP82349 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SgcbP82349 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
SgcbP82349 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
SgcbP82349 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
SgcbP82349 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SgcbP82349 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SgcbP82349 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SgcbP82349 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
SgcbP82349 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SgcbP82349 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SgcbP82349 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
SgcbP82349 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
SgcbP82349 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
SgcbP82349 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
SgcbP82349 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
SgcbP82349 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
SgcbP82349 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.15□□□□□ -0.63
SgcbP82349 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
SgcbP82349 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
SgcbP82349 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
SgcbP82349 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SgcbP82349 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcbP82349 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcbP82349 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcbP82349 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcbP82349 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.14□□□□□ -0.63
SgcbP82349 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcbP82349 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcbP82349 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcbP82349 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SgcbP82349 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
SgcbP82349 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcbP82349 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.14□□□□□ -0.63
SgcbP82349 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.14□□□□□ -0.63
SgcbP82349 Gm11222-201ENSMUST00000119005 738 ntBASIC11.14□□□□□ -0.63
SgcbP82349 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcbP82349 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
SgcbP82349 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.14□□□□□ -0.63
SgcbP82349 Mir6420-201ENSMUST00000185032 102 ntBASIC11.14□□□□□ -0.63
SgcbP82349 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC11.14□□□□□ -0.63
SgcbP82349 Gm6621-201ENSMUST00000193251 772 ntBASIC11.14□□□□□ -0.63
SgcbP82349 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.14□□□□□ -0.63
SgcbP82349 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcbP82349 Gm35638-201ENSMUST00000220724 652 ntBASIC11.14□□□□□ -0.63
SgcbP82349 AC155266.1-201ENSMUST00000220762 904 ntBASIC11.14□□□□□ -0.63
SgcbP82349 Gm17872-201ENSMUST00000222550 532 ntBASIC11.14□□□□□ -0.63
SgcbP82349 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC11.14□□□□□ -0.63
SgcbP82349 Cts7-204ENSMUST00000225321 1257 ntBASIC11.14□□□□□ -0.63
SgcbP82349 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcbP82349 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcbP82349 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcbP82349 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.14□□□□□ -0.63
SgcbP82349 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcbP82349 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcbP82349 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
SgcbP82349 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcbP82349 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
SgcbP82349 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.14□□□□□ -0.63
SgcbP82349 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcbP82349 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
SgcbP82349 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.14□□□□□ -0.63
SgcbP82349 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
SgcbP82349 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcbP82349 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcbP82349 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcbP82349 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
SgcbP82349 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms