Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shox2P70390 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shox2P70390 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shox2P70390 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.29□□□□□ -0.44
Shox2P70390 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Shox2P70390 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Shox2P70390 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Shox2P70390 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.29□□□□□ -0.44
Shox2P70390 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shox2P70390 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shox2P70390 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Shox2P70390 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shox2P70390 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
Shox2P70390 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Shox2P70390 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.29□□□□□ -0.44
Shox2P70390 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Shox2P70390 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shox2P70390 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.28□□□□□ -0.44
Shox2P70390 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shox2P70390 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shox2P70390 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shox2P70390 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Shox2P70390 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shox2P70390 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shox2P70390 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shox2P70390 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Shox2P70390 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.28□□□□□ -0.44
Shox2P70390 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Shox2P70390 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shox2P70390 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.28□□□□□ -0.44
Shox2P70390 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.28□□□□□ -0.44
Shox2P70390 Gm16296-201ENSMUST00000159905 325 ntBASIC12.28□□□□□ -0.44
Shox2P70390 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.28□□□□□ -0.44
Shox2P70390 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.28□□□□□ -0.44
Shox2P70390 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.28□□□□□ -0.44
Shox2P70390 Gm4034-201ENSMUST00000187674 480 ntBASIC12.28□□□□□ -0.44
Shox2P70390 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Shox2P70390 Gm7774-201ENSMUST00000200064 533 ntBASIC12.28□□□□□ -0.44
Shox2P70390 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.28□□□□□ -0.44
Shox2P70390 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shox2P70390 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shox2P70390 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shox2P70390 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Shox2P70390 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shox2P70390 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shox2P70390 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shox2P70390 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.28□□□□□ -0.44
Shox2P70390 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shox2P70390 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shox2P70390 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shox2P70390 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shox2P70390 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shox2P70390 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shox2P70390 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Shox2P70390 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Shox2P70390 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.27□□□□□ -0.44
Shox2P70390 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Shox2P70390 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Shox2P70390 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Shox2P70390 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Shox2P70390 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Shox2P70390 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.27□□□□□ -0.44
Shox2P70390 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Shox2P70390 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Shox2P70390 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Shox2P70390 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.27□□□□□ -0.44
Shox2P70390 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Shox2P70390 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shox2P70390 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Shox2P70390 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Shox2P70390 Gm14704-201ENSMUST00000120300 874 ntBASIC12.27□□□□□ -0.45
Shox2P70390 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.27□□□□□ -0.45
Shox2P70390 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Shox2P70390 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.27□□□□□ -0.45
Shox2P70390 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.27□□□□□ -0.45
Shox2P70390 Gm5186-201ENSMUST00000218781 920 ntBASIC12.27□□□□□ -0.45
Shox2P70390 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shox2P70390 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Shox2P70390 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shox2P70390 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Shox2P70390 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.27□□□□□ -0.45
Shox2P70390 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.27□□□□□ -0.45
Shox2P70390 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.27□□□□□ -0.45
Shox2P70390 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shox2P70390 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Shox2P70390 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shox2P70390 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shox2P70390 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shox2P70390 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shox2P70390 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shox2P70390 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shox2P70390 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shox2P70390 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shox2P70390 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shox2P70390 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shox2P70390 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Shox2P70390 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Shox2P70390 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Shox2P70390 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shox2P70390 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms