Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Traf6P70196 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Traf6P70196 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Traf6P70196 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Traf6P70196 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Traf6P70196 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf6P70196 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf6P70196 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Traf6P70196 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf6P70196 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.31□□□□□ -0.44
Traf6P70196 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf6P70196 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf6P70196 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Traf6P70196 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Traf6P70196 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.31□□□□□ -0.44
Traf6P70196 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf6P70196 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf6P70196 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf6P70196 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.31□□□□□ -0.44
Traf6P70196 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Traf6P70196 Gm13829-201ENSMUST00000119600 138 ntBASIC12.31□□□□□ -0.44
Traf6P70196 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf6P70196 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Traf6P70196 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Traf6P70196 Gm26185-201ENSMUST00000157692 266 ntBASIC12.31□□□□□ -0.44
Traf6P70196 Gm22331-201ENSMUST00000158066 136 ntBASIC12.31□□□□□ -0.44
Traf6P70196 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.31□□□□□ -0.44
Traf6P70196 Gm16296-201ENSMUST00000159905 325 ntBASIC12.31□□□□□ -0.44
Traf6P70196 Gm23363-201ENSMUST00000175024 79 ntBASIC12.31□□□□□ -0.44
Traf6P70196 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.31□□□□□ -0.44
Traf6P70196 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.31□□□□□ -0.44
Traf6P70196 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.31□□□□□ -0.44
Traf6P70196 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.31□□□□□ -0.44
Traf6P70196 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.31□□□□□ -0.44
Traf6P70196 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf6P70196 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf6P70196 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf6P70196 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf6P70196 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf6P70196 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Traf6P70196 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf6P70196 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf6P70196 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Traf6P70196 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf6P70196 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Traf6P70196 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf6P70196 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf6P70196 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Traf6P70196 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Traf6P70196 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf6P70196 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Traf6P70196 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf6P70196 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf6P70196 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf6P70196 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf6P70196 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf6P70196 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Traf6P70196 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Traf6P70196 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf6P70196 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf6P70196 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.3□□□□□ -0.44
Traf6P70196 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Traf6P70196 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Traf6P70196 Gm13183-201ENSMUST00000118615 789 ntBASIC12.3□□□□□ -0.44
Traf6P70196 Gm14921-201ENSMUST00000118643 908 ntBASIC12.3□□□□□ -0.44
Traf6P70196 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.3□□□□□ -0.44
Traf6P70196 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Traf6P70196 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Traf6P70196 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.3□□□□□ -0.44
Traf6P70196 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Traf6P70196 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.3□□□□□ -0.44
Traf6P70196 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Traf6P70196 Gm18062-201ENSMUST00000208020 547 ntBASIC12.3□□□□□ -0.44
Traf6P70196 Gm18055-201ENSMUST00000208254 547 ntBASIC12.3□□□□□ -0.44
Traf6P70196 Gm29705-201ENSMUST00000212598 474 ntBASIC12.3□□□□□ -0.44
Traf6P70196 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.3□□□□□ -0.44
Traf6P70196 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf6P70196 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf6P70196 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf6P70196 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf6P70196 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Traf6P70196 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf6P70196 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf6P70196 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf6P70196 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.3□□□□□ -0.44
Traf6P70196 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.3□□□□□ -0.44
Traf6P70196 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Traf6P70196 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.3□□□□□ -0.44
Traf6P70196 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Traf6P70196 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf6P70196 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Traf6P70196 Gm10652-201ENSMUST00000199790 2622 ntBASIC12.29□□□□□ -0.44
Traf6P70196 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Traf6P70196 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Traf6P70196 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Traf6P70196 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Traf6P70196 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Traf6P70196 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
Traf6P70196 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Traf6P70196 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms