Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Six5P70178 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Six5P70178 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Six5P70178 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Six5P70178 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Six5P70178 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Six5P70178 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Six5P70178 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Six5P70178 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Six5P70178 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.68□□□□□ -0.54
Six5P70178 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Six5P70178 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Six5P70178 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Six5P70178 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Six5P70178 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Six5P70178 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Six5P70178 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Six5P70178 Gm11597-201ENSMUST00000121423 964 ntBASIC11.68□□□□□ -0.54
Six5P70178 Gm13316-201ENSMUST00000140537 691 ntBASIC11.68□□□□□ -0.54
Six5P70178 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Six5P70178 Gm27023-201ENSMUST00000182372 285 ntBASIC11.68□□□□□ -0.54
Six5P70178 Gm27243-201ENSMUST00000183964 521 ntBASIC11.68□□□□□ -0.54
Six5P70178 Gm6007-201ENSMUST00000208170 823 ntBASIC11.68□□□□□ -0.54
Six5P70178 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Six5P70178 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.68□□□□□ -0.54
Six5P70178 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.68□□□□□ -0.54
Six5P70178 Gm10478-201ENSMUST00000084451 396 ntBASIC11.68□□□□□ -0.54
Six5P70178 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Six5P70178 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Six5P70178 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Six5P70178 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.68□□□□□ -0.54
Six5P70178 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Six5P70178 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Six5P70178 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Six5P70178 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Six5P70178 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Six5P70178 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Six5P70178 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Six5P70178 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Six5P70178 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Six5P70178 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Six5P70178 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Six5P70178 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Six5P70178 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Six5P70178 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Six5P70178 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Six5P70178 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Six5P70178 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Six5P70178 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.67□□□□□ -0.54
Six5P70178 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.67□□□□□ -0.54
Six5P70178 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.67□□□□□ -0.54
Six5P70178 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Six5P70178 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Six5P70178 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Six5P70178 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.67□□□□□ -0.54
Six5P70178 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Six5P70178 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Six5P70178 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Six5P70178 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Six5P70178 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Six5P70178 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.67□□□□□ -0.54
Six5P70178 Gm13786-201ENSMUST00000122371 333 ntBASIC11.67□□□□□ -0.54
Six5P70178 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.67□□□□□ -0.54
Six5P70178 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Six5P70178 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Six5P70178 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.67□□□□□ -0.54
Six5P70178 Gm38158-201ENSMUST00000194617 339 ntBASIC11.67□□□□□ -0.54
Six5P70178 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.67□□□□□ -0.54
Six5P70178 Gm45880-201ENSMUST00000213041 853 ntBASIC11.67□□□□□ -0.54
Six5P70178 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.67□□□□□ -0.54
Six5P70178 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Six5P70178 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Six5P70178 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Six5P70178 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Six5P70178 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Six5P70178 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Six5P70178 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Six5P70178 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Six5P70178 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Six5P70178 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Six5P70178 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Six5P70178 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Six5P70178 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.67□□□□□ -0.54
Six5P70178 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.67□□□□□ -0.54
Six5P70178 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.67□□□□□ -0.54
Six5P70178 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.67□□□□□ -0.54
Six5P70178 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Six5P70178 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Six5P70178 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.67□□□□□ -0.54
Six5P70178 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Six5P70178 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Six5P70178 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Six5P70178 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Six5P70178 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Six5P70178 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Six5P70178 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Six5P70178 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Six5P70178 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Six5P70178 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Six5P70178 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms