Protein–RNA interactions for Protein: P56399

Usp5, Ubiquitin carboxyl-terminal hydrolase 5, mousemouse

Known RBP Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp5P56399 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp5P56399 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Usp5P56399 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp5P56399 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Usp5P56399 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp5P56399 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp5P56399 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.53□□□□□ -0.08
Usp5P56399 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp5P56399 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp5P56399 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.53□□□□□ -0.08
Usp5P56399 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp5P56399 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp5P56399 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.53□□□□□ -0.08
Usp5P56399 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp5P56399 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Usp5P56399 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Usp5P56399 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Usp5P56399 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Usp5P56399 Gm10782-202ENSMUST00000223775 1480 ntBASIC14.53□□□□□ -0.08
Usp5P56399 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Usp5P56399 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Usp5P56399 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.53□□□□□ -0.08
Usp5P56399 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Usp5P56399 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.53□□□□□ -0.08
Usp5P56399 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Usp5P56399 Gm10371-202ENSMUST00000228010 1081 ntBASIC14.53□□□□□ -0.08
Usp5P56399 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp5P56399 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp5P56399 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp5P56399 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp5P56399 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp5P56399 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Usp5P56399 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Usp5P56399 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp5P56399 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Usp5P56399 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp5P56399 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp5P56399 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.53□□□□□ -0.08
Usp5P56399 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp5P56399 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp5P56399 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.53□□□□□ -0.08
Usp5P56399 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Usp5P56399 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Usp5P56399 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Usp5P56399 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Usp5P56399 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Usp5P56399 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Usp5P56399 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Usp5P56399 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Usp5P56399 Gm24231-201ENSMUST00000104315 133 ntBASIC14.52□□□□□ -0.09
Usp5P56399 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Usp5P56399 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Usp5P56399 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Usp5P56399 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Usp5P56399 Gm4819-201ENSMUST00000182170 1009 ntBASIC14.52□□□□□ -0.09
Usp5P56399 Gm9022-201ENSMUST00000182482 992 ntBASIC14.52□□□□□ -0.09
Usp5P56399 Gm28882-201ENSMUST00000185504 314 ntBASIC14.52□□□□□ -0.09
Usp5P56399 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Usp5P56399 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.52□□□□□ -0.09
Usp5P56399 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC14.52□□□□□ -0.09
Usp5P56399 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.52□□□□□ -0.09
Usp5P56399 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Usp5P56399 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Usp5P56399 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Usp5P56399 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Usp5P56399 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Usp5P56399 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Usp5P56399 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Usp5P56399 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Usp5P56399 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Usp5P56399 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Usp5P56399 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Usp5P56399 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.52□□□□□ -0.09
Usp5P56399 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Usp5P56399 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.51□□□□□ -0.09
Usp5P56399 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Usp5P56399 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Usp5P56399 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.51□□□□□ -0.09
Usp5P56399 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Usp5P56399 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Usp5P56399 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Usp5P56399 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.51□□□□□ -0.09
Usp5P56399 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Usp5P56399 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Usp5P56399 Gm24830-201ENSMUST00000102024 166 ntBASIC14.51□□□□□ -0.09
Usp5P56399 Gm14109-201ENSMUST00000118814 309 ntBASIC14.51□□□□□ -0.09
Usp5P56399 Gm15276-201ENSMUST00000145953 498 ntBASIC14.51□□□□□ -0.09
Usp5P56399 Gm24845-201ENSMUST00000158034 109 ntBASIC14.51□□□□□ -0.09
Usp5P56399 Gm25890-201ENSMUST00000177643 165 ntBASIC14.51□□□□□ -0.09
Usp5P56399 Rnu1b2-201ENSMUST00000178073 165 ntBASIC14.51□□□□□ -0.09
Usp5P56399 Rnu1b1-201ENSMUST00000178250 165 ntBASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms