Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cacnb3P54285 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacnb3P54285 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.51□□□□□ -0.09
Cacnb3P54285 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacnb3P54285 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacnb3P54285 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacnb3P54285 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cacnb3P54285 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacnb3P54285 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacnb3P54285 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacnb3P54285 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacnb3P54285 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Cacnb3P54285 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cacnb3P54285 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.5□□□□□ -0.09
Cacnb3P54285 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.5□□□□□ -0.09
Cacnb3P54285 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cacnb3P54285 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacnb3P54285 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacnb3P54285 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacnb3P54285 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC14.5□□□□□ -0.09
Cacnb3P54285 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cacnb3P54285 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC14.5□□□□□ -0.09
Cacnb3P54285 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Cacnb3P54285 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cacnb3P54285 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacnb3P54285 AC166992.1-201ENSMUST00000216356 565 ntBASIC14.5□□□□□ -0.09
Cacnb3P54285 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacnb3P54285 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.5□□□□□ -0.09
Cacnb3P54285 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cacnb3P54285 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacnb3P54285 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cacnb3P54285 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cacnb3P54285 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacnb3P54285 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC14.5□□□□□ -0.09
Cacnb3P54285 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.5□□□□□ -0.09
Cacnb3P54285 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacnb3P54285 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacnb3P54285 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacnb3P54285 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC14.49□□□□□ -0.09
Cacnb3P54285 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacnb3P54285 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacnb3P54285 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cacnb3P54285 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cacnb3P54285 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacnb3P54285 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacnb3P54285 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacnb3P54285 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cacnb3P54285 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Cacnb3P54285 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Cacnb3P54285 Gm25881-201ENSMUST00000157783 103 ntBASIC14.49□□□□□ -0.09
Cacnb3P54285 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cacnb3P54285 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Cacnb3P54285 Gm18038-201ENSMUST00000197900 485 ntBASIC14.49□□□□□ -0.09
Cacnb3P54285 Gm42682-201ENSMUST00000198349 1265 ntBASIC14.49□□□□□ -0.09
Cacnb3P54285 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC14.49□□□□□ -0.09
Cacnb3P54285 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Cacnb3P54285 Gm1821-202ENSMUST00000227415 750 ntBASIC14.49□□□□□ -0.09
Cacnb3P54285 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacnb3P54285 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacnb3P54285 Gm5455-201ENSMUST00000058710 715 ntBASIC14.49□□□□□ -0.09
Cacnb3P54285 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.49□□□□□ -0.09
Cacnb3P54285 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacnb3P54285 Gm21811-201ENSMUST00000096485 930 ntBASIC14.49□□□□□ -0.09
Cacnb3P54285 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacnb3P54285 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacnb3P54285 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacnb3P54285 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cacnb3P54285 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.49□□□□□ -0.09
Cacnb3P54285 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.49□□□□□ -0.09
Cacnb3P54285 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacnb3P54285 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.49□□□□□ -0.09
Cacnb3P54285 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacnb3P54285 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacnb3P54285 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cacnb3P54285 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cacnb3P54285 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cacnb3P54285 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cacnb3P54285 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cacnb3P54285 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cacnb3P54285 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cacnb3P54285 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cacnb3P54285 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cacnb3P54285 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cacnb3P54285 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cacnb3P54285 Gm12501-201ENSMUST00000119163 529 ntBASIC14.48□□□□□ -0.09
Cacnb3P54285 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC14.48□□□□□ -0.09
Cacnb3P54285 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC14.48□□□□□ -0.09
Cacnb3P54285 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cacnb3P54285 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC14.48□□□□□ -0.09
Cacnb3P54285 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC14.48□□□□□ -0.09
Cacnb3P54285 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC14.48□□□□□ -0.09
Cacnb3P54285 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cacnb3P54285 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cacnb3P54285 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cacnb3P54285 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cacnb3P54285 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cacnb3P54285 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.48□□□□□ -0.09
Cacnb3P54285 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cacnb3P54285 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cacnb3P54285 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms